RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SOX21Q9Y651 276 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-201ENST00000380829 IGHV4-38-2P0DP08 117 aa11.13□□□□□ -0.63
CLCN4-201ENST00000380829 AZU1P20160 251 aa11.13□□□□□ -0.63
CLCN4-201ENST00000380829 RASL11AQ6T310 242 aa11.13□□□□□ -0.63
CLCN4-201ENST00000380829 UBR5O95071 2799 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-201ENST00000380829 C9orf118A6NHY6 69 aa11.13□□□□□ -0.63
CLCN4-201ENST00000380829 G3V318 75 aa11.12□□□□□ -0.63
CLCN4-201ENST00000380829 OR10AG1Q8NH19 301 aa11.12□□□□□ -0.63
CLCN4-201ENST00000380829 Q9H3A6 140 aa11.12□□□□□ -0.63
CLCN4-201ENST00000380829 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
CLCN4-201ENST00000380829 POLQO75417 2590 aa11.12□□□□□ -0.63
CLCN4-201ENST00000380829 ZNF207O43670 478 aaKnown RBP11.11□□□□□ -0.63
CLCN4-201ENST00000380829 COX8AP10176 69 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 H3BRN7 92 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 MSMBP08118 114 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 COX6B1P14854 86 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 SEC11AP67812 179 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 OR2K2Q8NGT1 345 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 C7orf69Q9H7B7 122 aa11.11□□□□□ -0.63
CLCN4-201ENST00000380829 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 WI2-2373I1.2A0A1W2PRP0 233 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 FCGR2BP31994 310 aaPredicted RBP11.1□□□□□ -0.63
CLCN4-201ENST00000380829 RPL24P83731 157 aaKnown RBP11.1□□□□□ -0.63
CLCN4-201ENST00000380829 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 IGHV3-35A0A0C4DH35 117 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 TEX48A0A1B0GUV7 120 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 NCR2O95944 276 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 CSN3P07498 182 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
CLCN4-201ENST00000380829 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 FAM110DQ8TAY7 271 aaPredicted RBP11.1□□□□□ -0.63
CLCN4-201ENST00000380829 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 ZNF48Q96MX3 618 aaPredicted RBP11.1□□□□□ -0.63
CLCN4-201ENST00000380829 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
CLCN4-201ENST00000380829 IGHV3OR16-8A0A075B7F1 116 aa11.09□□□□□ -0.63
CLCN4-201ENST00000380829 MS4A6AQ9H2W1 248 aa11.09□□□□□ -0.63
CLCN4-201ENST00000380829 HIF1ANQ9NWT6 349 aa11.09□□□□□ -0.63
CLCN4-201ENST00000380829 SPCS1Q9Y6A9 102 aa11.09□□□□□ -0.63
CLCN4-201ENST00000380829 H3BRM9 83 aa11.09□□□□□ -0.63
CLCN4-201ENST00000380829 CHCHD1Q96BP2 118 aaKnown RBP11.09□□□□□ -0.63
CLCN4-201ENST00000380829 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
CLCN4-201ENST00000380829 CTSGP08311 255 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 HBBP68871 147 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 LINC00527Q9UJ94 153 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 MOB4Q9Y3A3 225 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 TCRAP04437 139 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 COL8A1P27658 744 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 LY6EQ16553 131 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 PGLYRP4Q96LB8 373 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 PTPN13Q12923 2485 aa11.08□□□□□ -0.64
CLCN4-201ENST00000380829 USP9YO00507 2555 aaPredicted RBP11.07□□□□□ -0.64
CLCN4-201ENST00000380829 A6NDN8 102 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 AVPP01185 164 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 FGF6P10767 208 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 TM4SF20Q53R12 229 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 ABCA12Q86UK0 2595 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 B4DSR2 109 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 MAPK1IP1LQ8NDC0 245 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
CLCN4-201ENST00000380829 ANKRD17O75179 2603 aaKnown RBP11.06□□□□□ -0.64
CLCN4-201ENST00000380829 A0A1B0GV72 72 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 A0A1W2PPM0 123 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 LINC00322Q6ZN03 302 aaPredicted RBP11.06□□□□□ -0.64
CLCN4-201ENST00000380829 GTSF1Q8WW33 167 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 NBPF19A0A087WUL8 3843 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 H3BUX3 64 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
CLCN4-201ENST00000380829 DSCR9P59020 149 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 ATP5L2Q7Z4Y8 100 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
CLCN4-201ENST00000380829 CLEC3BP05452 202 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 KRTAP10-9P60411 292 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 GPR82Q96P67 336 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 TSSC4Q9Y5U2 329 aaPredicted RBP11.05□□□□□ -0.64
CLCN4-201ENST00000380829 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.05□□□□□ -0.64
CLCN4-201ENST00000380829 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 RAB9AP51151 201 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 FAM162BQ5T6X4 162 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 FMC1Q96HJ9 113 aa11.05□□□□□ -0.64
CLCN4-201ENST00000380829 SCGB2A1O75556 95 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 HSD52Q0P140 79 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 CLEC19AQ6UXS0 136 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms