RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MTURNQ8N3F0 131 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 DEFB125Q8N687 156 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 TMEM14CQ9P0S9 112 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
SMAD9-202ENST00000379826 TNRC6BQ9UPQ9 1833 aaKnown RBP8.99□□□□□ -0.97
SMAD9-202ENST00000379826 MYO15AQ9UKN7 3530 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 SMAGPQ0VAQ4 97 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 C5orf64Q2M2E5 130 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 RUSC1-AS1Q66K80 236 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 LINC00311Q8N616 119 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 MBD6Q96DN6 1003 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 H3BRM9 83 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 SAP30O75446 220 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 CGB3P0DN86 165 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 CGB7P0DN87 165 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 LAGE3Q14657 143 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 HIST2H2BCQ6DN03 193 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 LYPD1Q8N2G4 141 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 APOMO95445 188 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 ANKRD39Q53RE8 183 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 CHTOPQ9Y3Y2 248 aaKnown RBP8.99□□□□□ -0.97
SMAD9-202ENST00000379826 HCFC1P51610 2035 aa8.99□□□□□ -0.97
SMAD9-202ENST00000379826 ZC2HC1BQ5TFG8 222 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 TRGV3P03979 118 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 ZNF479Q96JC4 524 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 SRSF1Q07955 248 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMAD9-202ENST00000379826 GTSF1LQ9H1H1 148 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 DPH3P1Q9H4G8 78 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 CADP27708 2225 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 IGFL3Q6UXB1 125 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 ZNF491Q8N8L2 437 aa8.98□□□□□ -0.97
SMAD9-202ENST00000379826 K7EP13 123 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 LOXL1Q08397 574 aaPredicted RBP8.97□□□□□ -0.97
SMAD9-202ENST00000379826 C3orf36Q3SXR2 165 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 ZMAT4Q9H898 229 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 IGHV3OR16-12A0A075B7B8 117 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 K7EP34 96 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 RRN3P1Q2M238 152 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 MRAPQ8TCY5 172 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 A6NJY4 79 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 NDUFS7O75251 213 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 GATA1P15976 413 aaPredicted RBP8.97□□□□□ -0.97
SMAD9-202ENST00000379826 ASIPP42127 132 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 PAX2Q02962 417 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 KLF12Q9Y4X4 402 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 PRR14LQ5THK1 2151 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 BDP1A6H8Y1 2624 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 EGR2P11161 476 aaPredicted RBP8.97□□□□□ -0.97
SMAD9-202ENST00000379826 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 I3L2K1 104 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 PPBPP02775 128 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 TMEM170BQ5T4T1 132 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 SIGLEC15Q6ZMC9 328 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 TMEM219Q86XT9 240 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 PRR25Q96S07 402 aa8.97□□□□□ -0.97
SMAD9-202ENST00000379826 LINC01545Q5VT33 79 aa8.96□□□□□ -0.97
SMAD9-202ENST00000379826 ADAMTSL5Q6ZMM2 481 aa8.96□□□□□ -0.97
SMAD9-202ENST00000379826 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 ABCA4P78363 2273 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 SPEGQ15772 3267 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 RAB9AP51151 201 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 SPOCK3Q9BQ16 436 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
SMAD9-202ENST00000379826 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
SMAD9-202ENST00000379826 SPRY2O43597 315 aa8.95□□□□□ -0.98
SMAD9-202ENST00000379826 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
SMAD9-202ENST00000379826 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
SMAD9-202ENST00000379826 A0A1W2PPM0 123 aa8.95□□□□□ -0.98
SMAD9-202ENST00000379826 HOXA3O43365 443 aaPredicted RBP8.95□□□□□ -0.98
SMAD9-202ENST00000379826 ZNF56Q15929 161 aa8.95□□□□□ -0.98
SMAD9-202ENST00000379826 CD300EQ496F6 205 aaPredicted RBP8.95□□□□□ -0.98
SMAD9-202ENST00000379826 EMP1P54849 157 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 IGFL2Q6UWQ7 119 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 RNF5Q99942 180 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 SLC50A1Q9BRV3 221 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 IGKV1-17P01599 117 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 CYSLTR1Q9Y271 337 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 SHISA9B4DS77 424 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 PDE6HQ13956 83 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 ROS1P08922 2347 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 K7EIM0 57 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 HTN3P15516 51 aa8.94□□□□□ -0.98
SMAD9-202ENST00000379826 IGHV3-64A0A075B6Q5 118 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 NPIPB6E9PJ23 425 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 DYSFO75923 2080 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 PSMB11A5LHX3 300 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 ID1P41134 155 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 C14orf178Q8N769 122 aaPredicted RBP8.93□□□□□ -0.98
SMAD9-202ENST00000379826 VWC2LB2RUY7 222 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms