RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZNF414Q96IQ9 312 aa15.02□□□□□ -0.01
SSU72-204ENST00000378726 C17orf77Q96MU5 243 aa15.02□□□□□ -0.01
SSU72-204ENST00000378726 RPP21Q9H633 154 aaKnown RBP15.02□□□□□ -0.01
SSU72-204ENST00000378726 CLEC5AQ9NY25 188 aa15.02□□□□□ -0.01
SSU72-204ENST00000378726 IGHV3OR16-8A0A075B7F1 116 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 TRAV9-2A0A087WT02 112 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 Q6YL49 198 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 GTSF1Q8WW33 167 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 M0QZ24 198 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 MRPS12O15235 138 aaKnown RBP15.01□□□□□ -0.01
SSU72-204ENST00000378726 HINT1P49773 126 aaPredicted RBP15.01□□□□□ -0.01
SSU72-204ENST00000378726 UBE2V1Q13404 147 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 RNASE8Q8TDE3 154 aaKnown RBP15.01□□□□□ -0.01
SSU72-204ENST00000378726 CCDC168Q8NDH2 2452 aa15.01□□□□□ -0.01
SSU72-204ENST00000378726 TRBV19A0A075B6N1 114 aa15□□□□□ -0.01
SSU72-204ENST00000378726 SMAD7O15105 426 aaKnown RBP15□□□□□ -0.01
SSU72-204ENST00000378726 IGLL1P15814 213 aa15□□□□□ -0.01
SSU72-204ENST00000378726 HBBP68871 147 aa15□□□□□ -0.01
SSU72-204ENST00000378726 SAPCD1Q5SSQ6 148 aa15□□□□□ -0.01
SSU72-204ENST00000378726 PRSS22Q9GZN4 317 aa15□□□□□ -0.01
SSU72-204ENST00000378726 K7EP13 123 aa15□□□□□ -0.01
SSU72-204ENST00000378726 BRI3O95415 125 aa15□□□□□ -0.01
SSU72-204ENST00000378726 FOXA3P55318 350 aaPredicted RBP15□□□□□ -0.01
SSU72-204ENST00000378726 EXOC3-AS1Q8N2X6 119 aa15□□□□□ -0.01
SSU72-204ENST00000378726 C5orf17Q8NAS9 161 aa15□□□□□ -0.01
SSU72-204ENST00000378726 ZNF738Q8NE65 137 aa15□□□□□ -0.01
SSU72-204ENST00000378726 PGLYRP4Q96LB8 373 aa15□□□□□ -0.01
SSU72-204ENST00000378726 OTORQ9NRC9 128 aa15□□□□□ -0.01
SSU72-204ENST00000378726 COX11Q9Y6N1 276 aa15□□□□□ -0.01
SSU72-204ENST00000378726 H3BUA1 57 aa14.99□□□□□ -0.01
SSU72-204ENST00000378726 Q6ZVH6 145 aa14.99□□□□□ -0.01
SSU72-204ENST00000378726 SMIM12Q96EX1 92 aa14.99□□□□□ -0.01
SSU72-204ENST00000378726 ATP6V0BQ99437 205 aa14.99□□□□□ -0.01
SSU72-204ENST00000378726 KLK15Q9H2R5 256 aa14.99□□□□□ -0.01
SSU72-204ENST00000378726 C19orf71A6NCJ1 209 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 LTAP01374 205 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 PF4V1P10720 104 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 ZFAND3Q9H8U3 227 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 P01737 135 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 VPREB3Q9UKI3 123 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 ITPR3Q14573 2671 aa14.98□□□□□ -0.01
SSU72-204ENST00000378726 A8MWL6 223 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 TCRAP04437 139 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 S100A7P31151 101 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 FMC1Q96HJ9 113 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 USMG5Q96IX5 58 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 MXRA5Q9NR99 2828 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 PDZD2O15018 2839 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 IGLV1-40P01703 118 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 RPL7P18124 248 aaKnown RBP14.97□□□□□ -0.01
SSU72-204ENST00000378726 COTL1Q14019 142 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 LINC00173Q6ZV60 143 aa14.97□□□□□ -0.01
SSU72-204ENST00000378726 HOXA3O43365 443 aaPredicted RBP14.96□□□□□ -0.01
SSU72-204ENST00000378726 CDKN1BP46527 198 aa14.96□□□□□ -0.01
SSU72-204ENST00000378726 TMEM95Q3KNT9 176 aa14.96□□□□□ -0.01
SSU72-204ENST00000378726 Q71RC1 249 aaPredicted RBP14.96□□□□□ -0.01
SSU72-204ENST00000378726 LYPD1Q8N2G4 141 aa14.96□□□□□ -0.01
SSU72-204ENST00000378726 ZNF492Q9P255 531 aa14.96□□□□□ -0.01
SSU72-204ENST00000378726 CFHR3Q02985 330 aa14.96□□□□□ -0.02
SSU72-204ENST00000378726 TMEM70Q9BUB7 260 aa14.96□□□□□ -0.02
SSU72-204ENST00000378726 TP73-AS1Q9UF72 201 aa14.96□□□□□ -0.02
SSU72-204ENST00000378726 TRAV8-1A0A0A6YYK1 113 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 RAB9AP51151 201 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 CT83Q5H943 113 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 SIGLEC15Q6ZMC9 328 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 LCNL1Q6ZST4 164 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 ZNF580Q9UK33 172 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 ITPR2Q14571 2701 aa14.95□□□□□ -0.02
SSU72-204ENST00000378726 GCN1Q92616 2671 aaKnown RBP14.95□□□□□ -0.02
SSU72-204ENST00000378726 IGHV1-24A0A0C4DH33 117 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 CLPSL1A2RUU4 121 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 IGHV3-11P01762 117 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 ARL3P36405 182 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 DAZAP1Q96EP5 407 aaKnown RBP14.94□□□□□ -0.02
SSU72-204ENST00000378726 PDE6HQ13956 83 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 FOXC2Q99958 501 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 SMAD5-AS1Q9Y6J3 95 aa14.94□□□□□ -0.02
SSU72-204ENST00000378726 BUB3O43684 328 aa14.93□□□□□ -0.02
SSU72-204ENST00000378726 TRBV12-3P01733 135 aa14.93□□□□□ -0.02
SSU72-204ENST00000378726 RBPMS2Q6ZRY4 209 aaKnown RBP14.93□□□□□ -0.02
SSU72-204ENST00000378726 IL17RELQ6ZVW7 336 aa14.93□□□□□ -0.02
SSU72-204ENST00000378726 UNC79Q9P2D8 2635 aa14.93□□□□□ -0.02
SSU72-204ENST00000378726 A0A0G2JLM5 398 aa14.93□□□□□ -0.02
SSU72-204ENST00000378726 OR4C46A6NHA9 309 aa14.93□□□□□ -0.02
SSU72-204ENST00000378726 TLN2Q9Y4G6 2542 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.92□□□□□ -0.02
SSU72-204ENST00000378726 ZNF207O43670 478 aaKnown RBP14.92□□□□□ -0.02
SSU72-204ENST00000378726 GOLT1AQ6ZVE7 132 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 Q86TA4 180 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 CHCHD1Q96BP2 118 aaKnown RBP14.92□□□□□ -0.02
SSU72-204ENST00000378726 METTL26Q96S19 204 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 GFRA4Q9GZZ7 299 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 FAM162BQ5T6X4 162 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 OR4X2Q8NGF9 303 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 AAMDCQ9H7C9 122 aa14.92□□□□□ -0.02
SSU72-204ENST00000378726 IGHV3-66A0A0C4DH42 116 aa14.91□□□□□ -0.02
SSU72-204ENST00000378726 NPIPB6E9PJ23 425 aa14.91□□□□□ -0.02
SSU72-204ENST00000378726 SYS1-DBNDD2H3BUS1 97 aa14.91□□□□□ -0.02
SSU72-204ENST00000378726 CRXO43186 299 aaPredicted RBP14.91□□□□□ -0.02
SSU72-204ENST00000378726 APOHP02749 345 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms