RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NBEAL2Q6ZNJ1 2754 aa13.58□□□□□ -0.24
SSU72-203ENST00000378725 TSPOP30536 169 aa13.58□□□□□ -0.24
SSU72-203ENST00000378725 SUMO1P63165 101 aaKnown RBP13.58□□□□□ -0.24
SSU72-203ENST00000378725 WWC2-AS2Q96NR7 200 aa13.58□□□□□ -0.24
SSU72-203ENST00000378725 NEU1Q99519 415 aa13.58□□□□□ -0.24
SSU72-203ENST00000378725 YTHDF2Q9Y5A9 579 aaKnown RBP13.58□□□□□ -0.24
SSU72-203ENST00000378725 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
SSU72-203ENST00000378725 GGTLC3B5MD39 225 aa13.57□□□□□ -0.24
SSU72-203ENST00000378725 C5orf17Q8NAS9 161 aa13.57□□□□□ -0.24
SSU72-203ENST00000378725 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
SSU72-203ENST00000378725 ZNF492Q9P255 531 aa13.57□□□□□ -0.24
SSU72-203ENST00000378725 GOLT1BQ9Y3E0 138 aa13.57□□□□□ -0.24
SSU72-203ENST00000378725 TENM3Q9P273 2699 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 TRAV12-2A0A075B6T6 113 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 TRBV7-9A0A0J9YWB2 115 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 FAM74A7A6NL05 159 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 INSP01308 110 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 MIFP14174 115 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 LEPP41159 167 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 TMEM78Q5T7P6 136 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 EPDR1Q9UM22 224 aa13.56□□□□□ -0.24
SSU72-203ENST00000378725 SERTM2A0A1B0GWG4 89 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 SMIM9A6NGZ8 99 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 NMBP08949 121 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 CRISP2P16562 243 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 ZNF138P52744 262 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 GNG5P63218 68 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 KIR3DS1Q14943 382 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 Q8NAQ8 132 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 ARL2-SNX15V9GYD0 113 aa13.55□□□□□ -0.24
SSU72-203ENST00000378725 A0A0J9YWU9 116 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 KLLNB2CW77 178 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 TCRAP04437 139 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 RBMY1A1P0DJD3 496 aaKnown RBP13.54□□□□□ -0.24
SSU72-203ENST00000378725 RBMY1CP0DJD4 496 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 UBE2G2P60604 165 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 RBMY1FQ15415 496 aaKnown RBP13.54□□□□□ -0.24
SSU72-203ENST00000378725 GOLT1AQ6ZVE7 132 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 CCDC28AQ8IWP9 274 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 C20orf144Q9BQM9 153 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
SSU72-203ENST00000378725 LENEPQ9Y5L5 61 aa13.54□□□□□ -0.24
SSU72-203ENST00000378725 GFI1BQ5VTD9 330 aa13.53□□□□□ -0.24
SSU72-203ENST00000378725 ZFAND2AQ8N6M9 145 aa13.53□□□□□ -0.24
SSU72-203ENST00000378725 RPH3ALQ9UNE2 315 aa13.53□□□□□ -0.24
SSU72-203ENST00000378725 IGHV3OR16-12A0A075B7B8 117 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 IGHV4-28A0A0C4DH34 117 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 A0A1B0GV50 99 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 PPT1P50897 306 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 CCL20P78556 96 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 ALKAL2Q6UX46 152 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 TMEM256Q8N2U0 113 aa13.52□□□□□ -0.25
SSU72-203ENST00000378725 PAGE4O60829 102 aa13.51□□□□□ -0.25
SSU72-203ENST00000378725 HBE1P02100 147 aa13.51□□□□□ -0.25
SSU72-203ENST00000378725 Q8TAT8 98 aa13.51□□□□□ -0.25
SSU72-203ENST00000378725 ATG101Q9BSB4 218 aa13.51□□□□□ -0.25
SSU72-203ENST00000378725 TMEM208Q9BTX3 173 aa13.51□□□□□ -0.25
SSU72-203ENST00000378725 C7orf71A4D174 169 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 TEX46H3BTG2 121 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 K7EQM0 130 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 ZNF324O75467 553 aaPredicted RBP13.5□□□□□ -0.25
SSU72-203ENST00000378725 IFNA7P01567 189 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 IGLV2-11P01706 119 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 PMS2P11Q13670 270 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 CYB561D1Q8N8Q1 229 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 HIST1H2BAQ96A08 127 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 LINC01587Q99440 93 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
SSU72-203ENST00000378725 TRAV8-1A0A0A6YYK1 113 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 FBLL1A6NHQ2 334 aaKnown RBP13.49□□□□□ -0.25
SSU72-203ENST00000378725 H7BYZ3 331 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 J3KRW8 73 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 DEFB4AO15263 64 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 GPX1P07203 203 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 TAS2R60P59551 318 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 RRN3P1Q2M238 152 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 CST9LP1Q5W188 147 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 TMEM75Q8N9X5 138 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 TVP23CQ96ET8 276 aa13.49□□□□□ -0.25
SSU72-203ENST00000378725 TRAV12-3A0A0B4J271 114 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
SSU72-203ENST00000378725 RNASE4P34096 147 aaKnown RBP13.48□□□□□ -0.25
SSU72-203ENST00000378725 ATP5G3P48201 142 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 BTN1A1Q13410 526 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 PRR9Q5T870 116 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 IL17DQ8TAD2 202 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 MANBALQ9NQG1 85 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 PSG8Q9UQ74 426 aa13.48□□□□□ -0.25
SSU72-203ENST00000378725 STAB2Q8WWQ8 2551 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 PEX7O00628 323 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 PRM2P04554 102 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 BLOC1S1P78537 153 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 MUC7Q8TAX7 377 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 SGK494Q96LW2 274 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 LINC00479Q96M42 142 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
SSU72-203ENST00000378725 F6UZH7 168 aa13.46□□□□□ -0.25
SSU72-203ENST00000378725 AZU1P20160 251 aa13.46□□□□□ -0.25
SSU72-203ENST00000378725 FLI1Q01543 452 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms