RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 LY6DQ14210 128 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 MRPL51Q4U2R6 128 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 PRELID3AQ96N28 172 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 AKAP6Q13023 2319 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 LINC01548A6NM66 108 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 PRAC2D3DTV9 90 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 ERCC8Q13216 396 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 OR10AG1Q8NH19 301 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 PSMG3-AS1Q96PY0 264 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 UBE2E1P51965 193 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 ABCA2Q9BZC7 2435 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 G3V318 75 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 SMKR1H3BMG3 65 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 IGLC6P0CF74 106 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 RNF182Q8N6D2 247 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 FER1L6-AS1Q8NA97 138 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 CCDC140Q96MF4 163 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 VPS25Q9BRG1 176 aa15.1■□□□□ 0.01
SHROOM1-202ENST00000378676 IGHV3-66A0A0C4DH42 116 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 HSBP1L1C9JCN9 74 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 MPV17L2Q567V2 206 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 SLC25A34Q6PIV7 304 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 CST9LQ9H4G1 147 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 ITPR1Q14643 2758 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 CLEC3BP05452 202 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 FXYD7P58549 80 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 OCIAD2Q56VL3 154 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 ORMDL3Q8N138 153 aa15.09■□□□□ 0.01
SHROOM1-202ENST00000378676 BPESC1Q9GZL8 116 aa15.08■□□□□ 0
SHROOM1-202ENST00000378676 CLPSL1A2RUU4 121 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 FBLL1A6NHQ2 334 aaKnown RBP15.07■□□□□ 0
SHROOM1-202ENST00000378676 BUB3O43684 328 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 LMO4P61968 165 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 IGHV3OR16-13A0A075B7E8 117 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 IGHV3-74A0A0B4J1X5 117 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 CBY3A6NI87 242 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 NPYP01303 97 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 BMI1P35226 326 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 TWIST1Q15672 202 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 CLEC19AQ6UXS0 136 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 OR8A1Q8NGG7 326 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 MSRB1Q9NZV6 116 aa15.07■□□□□ 0
SHROOM1-202ENST00000378676 A0A087X0K7 114 aa15.06■□□□□ 0
SHROOM1-202ENST00000378676 EFNA4P52798 201 aa15.06■□□□□ 0
SHROOM1-202ENST00000378676 KLK9Q2XQG4 91 aa15.06■□□□□ 0
SHROOM1-202ENST00000378676 KLK9Q9UKQ9 250 aa15.06■□□□□ 0
SHROOM1-202ENST00000378676 FOXE3Q13461 319 aa15.06■□□□□ 0
SHROOM1-202ENST00000378676 PKD1L2Q7Z442 2459 aa15.06■□□□□ 0
SHROOM1-202ENST00000378676 TAX1BP3O14907 124 aa15.05■□□□□ 0
SHROOM1-202ENST00000378676 ORM1P02763 201 aa15.05■□□□□ 0
SHROOM1-202ENST00000378676 MS4A6AQ9H2W1 248 aa15.05■□□□□ 0
SHROOM1-202ENST00000378676 ZFHX3Q15911 3703 aa15.05■□□□□ -0
SHROOM1-202ENST00000378676 IGHV3-49A0A0A0MS15 119 aa15.05■□□□□ -0
SHROOM1-202ENST00000378676 PAX8Q06710 450 aa15.05■□□□□ -0
SHROOM1-202ENST00000378676 IL17RELQ6ZVW7 336 aa15.05■□□□□ -0
SHROOM1-202ENST00000378676 CSTL1Q9H114 145 aa15.05■□□□□ -0
SHROOM1-202ENST00000378676 CENPVL3A0A0U1RRI6 287 aa15.04■□□□□ -0
SHROOM1-202ENST00000378676 NUDT3O95989 172 aa15.04■□□□□ -0
SHROOM1-202ENST00000378676 ZNF207O43670 478 aaKnown RBP15.04■□□□□ -0
SHROOM1-202ENST00000378676 CKS2P33552 79 aa15.04■□□□□ -0
SHROOM1-202ENST00000378676 BVES-AS1Q5T3Y7 98 aa15.04■□□□□ -0
SHROOM1-202ENST00000378676 NPFFO15130 113 aa15.03■□□□□ -0
SHROOM1-202ENST00000378676 GAS8-AS1O95177 125 aa15.03■□□□□ -0
SHROOM1-202ENST00000378676 SRSF2Q01130 221 aaKnown RBP15.03■□□□□ -0
SHROOM1-202ENST00000378676 DEFB125Q8N687 156 aa15.03■□□□□ -0
SHROOM1-202ENST00000378676 RNF185Q96GF1 192 aa15.03■□□□□ -0
SHROOM1-202ENST00000378676 C19orf84I3L1E1 186 aa15.03■□□□□ -0
SHROOM1-202ENST00000378676 GOSR1O95249 250 aa15.03■□□□□ -0
SHROOM1-202ENST00000378676 FABP5P3A8MUU1 101 aa15.02■□□□□ -0
SHROOM1-202ENST00000378676 S100A7P31151 101 aa15.02■□□□□ -0
SHROOM1-202ENST00000378676 TMEM219Q86XT9 240 aa15.02■□□□□ -0
SHROOM1-202ENST00000378676 C5orf56Q8N8D9 126 aa15.02■□□□□ -0
SHROOM1-202ENST00000378676 TRAV8-2A0A0B4J237 113 aa15.02□□□□□ -0.01
SHROOM1-202ENST00000378676 K7ERU9 68 aa15.02□□□□□ -0.01
SHROOM1-202ENST00000378676 PPIFP30405 207 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-202ENST00000378676 ERASQ7Z444 233 aa15.02□□□□□ -0.01
SHROOM1-202ENST00000378676 LINC01559Q495D7 138 aa15.01□□□□□ -0.01
SHROOM1-202ENST00000378676 C12orf54Q6X4T0 127 aa15.01□□□□□ -0.01
SHROOM1-202ENST00000378676 EEF1AKMT3Q96AZ1 226 aa15.01□□□□□ -0.01
SHROOM1-202ENST00000378676 SLC50A1Q9BRV3 221 aa15.01□□□□□ -0.01
SHROOM1-202ENST00000378676 CNFNQ9BYD5 112 aa15.01□□□□□ -0.01
SHROOM1-202ENST00000378676 IGHV3OR16-10A0A075B7F0 116 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 HBDP02042 147 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 COX8AP10176 69 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 UQCRFS1P47985 274 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 RAB9AP51151 201 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 CACNG7P62955 275 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 PRSS57Q6UWY2 283 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 C2orf91Q6ZV80 131 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 C11orf21Q9P2W6 132 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 SNAI2O43623 268 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 ITLN2Q8WWU7 325 aaPredicted RBP15□□□□□ -0.01
SHROOM1-202ENST00000378676 AGPAT4-IT1Q9H0P7 198 aa15□□□□□ -0.01
SHROOM1-202ENST00000378676 RBAKDNA6NC62 111 aa14.99□□□□□ -0.01
SHROOM1-202ENST00000378676 LINC00527Q9UJ94 153 aa14.99□□□□□ -0.01
SHROOM1-202ENST00000378676 ACACBO00763 2458 aa14.99□□□□□ -0.01
SHROOM1-202ENST00000378676 IGKV3D-20A0A0C4DH25 116 aa14.98□□□□□ -0.01
SHROOM1-202ENST00000378676 HIST1H1AQ02539 215 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms