RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MYO18BQ8IUG5 2567 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 COL6A6A6NMZ7 2263 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 WNK2Q9Y3S1 2297 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 IGHV3-21A0A0B4J1V1 117 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 A0A1B0GXF2 115 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 WI2-2373I1.2A0A1W2PRP0 233 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 GRIFINA4D1Z8 144 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 C19orf71A6NCJ1 209 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 FAM231BA6NCW3 169 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 PGPA6NDG6 321 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 A8MWP6 167 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 NUPR1O60356 82 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 OR2J3O76001 311 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 LY6HO94772 140 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 CNIH1O95406 144 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 HLA-DRB1P01911 266 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 FRMD6-AS1P0C7T7 363 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 RD3LP0DJH9 198 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 APELAP0DMC3 54 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 IGLC2P0DOY2 106 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 FCGR2BP31994 310 aaPredicted RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 BRS3P32247 399 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 CRIP2P52943 208 aaPredicted RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 TCL1AP56279 114 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 LYZP61626 148 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 GNG5P63218 68 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 PRB3Q04118 309 aaPredicted RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 RELQ04864 619 aaPredicted RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 KLRD1Q13241 179 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 KLK9Q2XQG4 91 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 MRPL54Q6P161 138 aaKnown RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 ZNF562Q6V9R5 426 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 VMO1Q7Z5L0 202 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 LHFPL4Q7Z7J7 247 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 Q86TA4 180 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 NFE4Q86UQ8 179 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 BAGE3Q86Y29 109 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 LYPD1Q8N2G4 141 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 ZNF664Q8N3J9 261 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 TTC9CQ8N5M4 171 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 ZNF491Q8N8L2 437 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 NUP35Q8NFH5 326 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 OR4B1Q8NGF8 309 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 BLNKQ8WV28 456 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 C14orf144Q96I85 54 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 KCNS1Q96KK3 526 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 LINC00479Q96M42 142 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 ASCL2Q99929 193 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 GFRA4Q9GZZ7 299 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 SIRPDQ9H106 197 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 PRO1933Q9H354 126 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 PRORYQ9H606 182 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 RPP21Q9H633 154 aaKnown RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 GNB4Q9HAV0 340 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 ZNF586Q9NXT0 402 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 NAGKQ9UJ70 344 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 KLK9Q9UKQ9 250 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 TBL2Q9Y4P3 447 aaKnown RBP3.69□□□□□ -1.82
USP48-202ENST00000374730 RELNP78509 3460 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 ZNF462Q96JM2 2506 aa3.69□□□□□ -1.82
USP48-202ENST00000374730 IGSF10Q6WRI0 2623 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 TRBV19A0A075B6N1 114 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 IGHV2-70DA0A0C4DH43 119 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 SERTM2A0A1B0GWG4 89 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 A0A1W2PPR1 153 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 HIGD1CA8MV81 97 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 A8MWL6 223 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 F2Z2F3 143 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 MRPS12O15235 138 aaKnown RBP3.68□□□□□ -1.82
USP48-202ENST00000374730 SCGB2A1O75556 95 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 CA1P00915 261 aaPredicted RBP3.68□□□□□ -1.82
USP48-202ENST00000374730 P01737 135 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 APCSP02743 223 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 CFC1P0CG37 223 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 SRIP30626 198 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 EFNA4P52798 201 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 NDPQ00604 133 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 KLF5Q13887 457 aaPredicted RBP3.68□□□□□ -1.82
USP48-202ENST00000374730 PDE6HQ13956 83 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 C1orf194Q5T5A4 169 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 SIGLEC15Q6ZMC9 328 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 TEX43Q6ZNM6 134 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 TMEM219Q86XT9 240 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 BPIFA4PQ86YQ2 179 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 TMEM75Q8N9X5 138 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 OR4F17Q8NGA8 305 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 C20orf144Q9BQM9 153 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 HSPB9Q9BQS6 159 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 NDUFAF3Q9BU61 184 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 THYN1Q9P016 225 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 HILPDAQ9Y5L2 63 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
USP48-202ENST00000374730 NOTCH3Q9UM47 2321 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 TEX15Q9BXT5 2789 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 FBLL1A6NHQ2 334 aaKnown RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 K7EQM0 130 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms