RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 U3KQK5 164 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 M0R2Z0 102 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 CRXO43186 299 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-201ENST00000374673 TCRAP04437 139 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 CDKN1BP46527 198 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 GNG5P63218 68 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 TMEM78Q5T7P6 136 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 FAM19A4Q96LR4 140 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 RPH3ALQ9UNE2 315 aa10.93□□□□□ -0.66
HSPG2-201ENST00000374673 TRBV7-9A0A0J9YWB2 115 aa10.92□□□□□ -0.66
HSPG2-201ENST00000374673 TSPOP30536 169 aa10.92□□□□□ -0.66
HSPG2-201ENST00000374673 LEPP41159 167 aa10.92□□□□□ -0.66
HSPG2-201ENST00000374673 BLOC1S1P78537 153 aa10.92□□□□□ -0.66
HSPG2-201ENST00000374673 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
HSPG2-201ENST00000374673 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
HSPG2-201ENST00000374673 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
HSPG2-201ENST00000374673 PAGE4O60829 102 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 INSP01308 110 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 CRISP2P16562 243 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 ZNF138P52744 262 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 CCL20P78556 96 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 PMS2P11Q13670 270 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 TEX261Q6UWH6 196 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 ZNF705AQ6ZN79 300 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-201ENST00000374673 OR11H2Q8NH07 326 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 RARRES2Q99969 163 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 TCEAL7Q9BRU2 100 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 ATG101Q9BSB4 218 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 MANBALQ9NQG1 85 aa10.91□□□□□ -0.66
HSPG2-201ENST00000374673 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 K7EQM0 130 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 NMBP08949 121 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 ATP5G3P48201 142 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 CYB561D1Q8N8Q1 229 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 HIST1H2BAQ96A08 127 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 C20orf144Q9BQM9 153 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
HSPG2-201ENST00000374673 KLLNB2CW77 178 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 IFNA7P01567 189 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 TMEM75Q8N9X5 138 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 Q8TAT8 98 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 NEU1Q99519 415 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 GNG13Q9P2W3 67 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 GOLT1BQ9Y3E0 138 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 X6R8D5 127 aa10.89□□□□□ -0.67
HSPG2-201ENST00000374673 TRAV8-1A0A0A6YYK1 113 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 FBLL1A6NHQ2 334 aaKnown RBP10.88□□□□□ -0.67
HSPG2-201ENST00000374673 F6UZH7 168 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 PEX7O00628 323 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
HSPG2-201ENST00000374673 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 KIR3DS1Q14943 382 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
HSPG2-201ENST00000374673 GFI1BQ5VTD9 330 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 ZNF680Q8NEM1 530 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 TXNDC17Q9BRA2 123 aa10.88□□□□□ -0.67
HSPG2-201ENST00000374673 C11orf94C9JXX5 98 aa10.87□□□□□ -0.67
HSPG2-201ENST00000374673 IFNA1P01562 189 aa10.87□□□□□ -0.67
HSPG2-201ENST00000374673 IGLV2-11P01706 119 aa10.87□□□□□ -0.67
HSPG2-201ENST00000374673 MIFP14174 115 aa10.87□□□□□ -0.67
HSPG2-201ENST00000374673 TMEM256Q8N2U0 113 aa10.87□□□□□ -0.67
HSPG2-201ENST00000374673 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 C7orf71A4D174 169 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 SMIM9A6NGZ8 99 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 J3KRW8 73 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 GPX1P07203 203 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
HSPG2-201ENST00000374673 FLI1Q01543 452 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-201ENST00000374673 Q8NAQ8 132 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 SGK494Q96LW2 274 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 PSG8Q9UQ74 426 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 COL7A1Q02388 2944 aa10.86□□□□□ -0.67
HSPG2-201ENST00000374673 BCL2P10415 239 aa10.85□□□□□ -0.67
HSPG2-201ENST00000374673 BTN1A1Q13410 526 aa10.85□□□□□ -0.67
HSPG2-201ENST00000374673 PRR9Q5T870 116 aa10.85□□□□□ -0.67
HSPG2-201ENST00000374673 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
HSPG2-201ENST00000374673 LINC00479Q96M42 142 aa10.85□□□□□ -0.67
HSPG2-201ENST00000374673 NDFIP1Q9BT67 221 aa10.85□□□□□ -0.67
HSPG2-201ENST00000374673 C11orf68Q9H3H3 251 aaKnown RBP10.85□□□□□ -0.67
HSPG2-201ENST00000374673 TRAV12-3A0A0B4J271 114 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 TRAV34A0A0B4J273 112 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 IGHV4-28A0A0C4DH34 117 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 SCO2A0A1W2PP80 73 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 H7BYZ3 331 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 ZNF324O75467 553 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-201ENST00000374673 AKR1C3P42330 323 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 MEF2BQ02080 365 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-201ENST00000374673 C2CD4CQ8TF44 421 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 FMC1Q96HJ9 113 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 LINC01587Q99440 93 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms