RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 IGHV3OR16-10A0A075B7F0 116 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 LOC389332A0A1B0GUA5 103 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 C9orf118A6NHY6 69 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 H3BRM9 83 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 OOSP1A8MZH6 123 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 PRB4P10163 310 aaPredicted RBP13.19□□□□□ -0.3
PHF1-202ENST00000374516 ATP5J2P56134 94 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 Q6AWC8 147 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 GTF2H5Q6ZYL4 71 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 Q8N6K4 173 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 RASL11BQ9BPW5 248 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 SIGLEC8Q9NYZ4 499 aa13.19□□□□□ -0.3
PHF1-202ENST00000374516 A6NDN8 102 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 K7EIM0 57 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 SAP30O75446 220 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 PSG3Q16557 428 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 AP1S3Q96PC3 154 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
PHF1-202ENST00000374516 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 D6R8Y8 96 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 K7EQM0 130 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 LGALS9BQ3B8N2 356 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 LGALS9CQ6DKI2 356 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 FER1L6-AS1Q8NA97 138 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 ARPC1AQ92747 370 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
PHF1-202ENST00000374516 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 FBN2P35556 2912 aa13.18□□□□□ -0.3
PHF1-202ENST00000374516 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
PHF1-202ENST00000374516 EBI3Q14213 229 aa13.17□□□□□ -0.3
PHF1-202ENST00000374516 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
PHF1-202ENST00000374516 CENPVL3A0A0U1RRI6 287 aa13.17□□□□□ -0.3
PHF1-202ENST00000374516 SHANK2-AS3Q9BTD1 123 aa13.17□□□□□ -0.3
PHF1-202ENST00000374516 U3KQK5 164 aa13.17□□□□□ -0.3
PHF1-202ENST00000374516 IGHV4-30-2A0A087WSY4 118 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 H3BUT2 72 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 LYPD1Q8N2G4 141 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 C10orf105Q8TEF2 133 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 JMJD8Q96S16 334 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 NPFFO15130 113 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 PRELID3AQ96N28 172 aa13.16□□□□□ -0.3
PHF1-202ENST00000374516 USP9YO00507 2555 aaPredicted RBP13.15□□□□□ -0.3
PHF1-202ENST00000374516 A1L4Q6 167 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 SMAD7O15105 426 aaKnown RBP13.15□□□□□ -0.3
PHF1-202ENST00000374516 CACNG7P62955 275 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 KIR3DS1Q14943 382 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 CLEC2AQ6UVW9 174 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 LYZL1Q6UWQ5 148 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 Q8N9W7 124 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 OR9G4Q8NGQ1 327 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 THYN1Q9P016 225 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
PHF1-202ENST00000374516 IGHV7-81A0A0B4J1V7 117 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 TMEM213A2RRL7 107 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 SIVA1O15304 175 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 S100A7P31151 101 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 TCTAP57738 103 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 FXYD7P58549 80 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 HSD52Q0P140 79 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 AMN1Q8IY45 258 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 ORMDL3Q8N138 153 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 C8orf49Q96NF6 230 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 A0A0G2JLM5 398 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 H3BRN7 92 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 K7EP34 96 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 BRD3OSQ6XYD6 125 aa13.14□□□□□ -0.31
PHF1-202ENST00000374516 G3V4G9 280 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 M0R3E3 92 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 IGHV3-23P01764 117 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 SPOCK3Q9BQ16 436 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 NAA38Q9BRA0 125 aaKnown RBP13.13□□□□□ -0.31
PHF1-202ENST00000374516 EGR2P11161 476 aaPredicted RBP13.13□□□□□ -0.31
PHF1-202ENST00000374516 RIPPLY3P57055 190 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 PAX8Q06710 450 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
PHF1-202ENST00000374516 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 HBDP02042 147 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 ZNF491Q8N8L2 437 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 TMSB15BA0A087X1C1 80 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 NPIPB5A8MRT5 1133 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
PHF1-202ENST00000374516 SRSF1Q07955 248 aaKnown RBP eCLIP13.12□□□□□ -0.313e-6■■■■□ 24
PHF1-202ENST00000374516 MRPL51Q4U2R6 128 aaKnown RBP13.12□□□□□ -0.31
PHF1-202ENST00000374516 TTC9CQ8N5M4 171 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 IFI27L1Q96BM0 104 aa13.12□□□□□ -0.31
PHF1-202ENST00000374516 ABCA12Q86UK0 2595 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms