RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 MAPKAPK5-AS1Q8N8E1 139 aa13.57□□□□□ -0.24
TRAPPC3-204ENST00000373166 ODF3Q96PU9 254 aa13.57□□□□□ -0.24
TRAPPC3-204ENST00000373166 C20orf144Q9BQM9 153 aa13.57□□□□□ -0.24
TRAPPC3-204ENST00000373166 HTN3P15516 51 aa13.56□□□□□ -0.24
TRAPPC3-204ENST00000373166 TAS2R60P59551 318 aa13.56□□□□□ -0.24
TRAPPC3-204ENST00000373166 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-204ENST00000373166 RNF141Q8WVD5 230 aa13.56□□□□□ -0.24
TRAPPC3-204ENST00000373166 FXYD5Q96DB9 178 aa13.56□□□□□ -0.24
TRAPPC3-204ENST00000373166 AQP10Q96PS8 301 aa13.56□□□□□ -0.24
TRAPPC3-204ENST00000373166 LRP1BQ9NZR2 4599 aa13.55□□□□□ -0.24
TRAPPC3-204ENST00000373166 ICAM4Q14773 271 aa13.55□□□□□ -0.24
TRAPPC3-204ENST00000373166 OXA1LQ15070 435 aa13.55□□□□□ -0.24
TRAPPC3-204ENST00000373166 ACOT6Q3I5F7 207 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-204ENST00000373166 FAM122CQ6P4D5 195 aa13.55□□□□□ -0.24
TRAPPC3-204ENST00000373166 H7BYZ3 331 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 CT45A10P0DMU9 189 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 HTN1P15515 57 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 FAM3BP58499 235 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 DAD1P61803 113 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 GFI1BQ5VTD9 330 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 C16orf74Q96GX8 76 aa13.54□□□□□ -0.24
TRAPPC3-204ENST00000373166 A0A1W2PPV4 95 aa13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 LYRM9A8MSI8 78 aa13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 J3KRW8 73 aa13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 PRM2P04554 102 aa13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 M6PRP20645 277 aa13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 TMEM88Q6PEY1 159 aa13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 INO80EQ8NBZ0 244 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-204ENST00000373166 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 AZU1P20160 251 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 TNP2Q05952 138 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 ERCC8Q13216 396 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 KIR3DS1Q14943 382 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 Q5BKY6 102 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 HSD17B11Q8NBQ5 300 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 OR2T35Q8NGX2 323 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 ZNF503Q96F45 646 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 LINC00477Q96M19 166 aa13.52□□□□□ -0.25
TRAPPC3-204ENST00000373166 IGKV2-40A0A087WW87 121 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 IGKV2D-40P01614 121 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 CSN1S1P47710 185 aa13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 RAB2AP61019 212 aa13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 TMEM78Q5T7P6 136 aa13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 LYPD1Q8N2G4 141 aa13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 TMEM263Q8WUH6 116 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 ATG101Q9BSB4 218 aa13.51□□□□□ -0.25
TRAPPC3-204ENST00000373166 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 SLC25A5P05141 298 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 RANP62826 216 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 C9orf47Q6ZRZ4 202 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 CCDC28AQ8IWP9 274 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 OR10G4Q8NGN3 311 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 OR10G9Q8NGN4 311 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 OR10G7Q8NGN6 311 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 OR2G3Q8NGZ4 309 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 PSMG3Q9BT73 122 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 AGPAT4-IT1Q9H0P7 198 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 Q9H3A6 140 aa13.5□□□□□ -0.25
TRAPPC3-204ENST00000373166 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
TRAPPC3-204ENST00000373166 PQLC2Q6ZP29 291 aa13.49□□□□□ -0.25
TRAPPC3-204ENST00000373166 RNASE8Q8TDE3 154 aaKnown RBP13.49□□□□□ -0.25
TRAPPC3-204ENST00000373166 TNFSF18Q9UNG2 199 aa13.49□□□□□ -0.25
TRAPPC3-204ENST00000373166 C7orf71A4D174 169 aa13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 EIF3GO75821 320 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 DEFB130BP0DP73 79 aa13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 DEFB130AP0DP74 79 aa13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 ATP6V0CP27449 155 aa13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 Q8N1X5 172 aa13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 TIMM8BQ9Y5J9 83 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-204ENST00000373166 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 RNF222A6NCQ9 220 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 KLLNB2CW77 178 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 CRISP2P16562 243 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 CDC34P49427 236 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 C6orf223Q8N319 242 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 FAM19A4Q96LR4 140 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 VGLL1Q99990 258 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 PYGO2Q9BRQ0 406 aa13.47□□□□□ -0.25
TRAPPC3-204ENST00000373166 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 MBP02144 154 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 GPX1P07203 203 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 NMBP08949 121 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 SERF2P84101 59 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 BTN1A1Q13410 526 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 FAM74A1Q5RGS3 127 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 RXFP4Q8TDU9 374 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 OTORQ9NRC9 128 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 ZNF492Q9P255 531 aa13.46□□□□□ -0.25
TRAPPC3-204ENST00000373166 RBAKDNA6NC62 111 aa13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 SNURFLB1AK76 121 aa13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 HMGB3O15347 200 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 ZNF138P52744 262 aa13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 CMTM2Q8TAZ6 248 aa13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 GNPNAT1Q96EK6 184 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 SH3BGRL3Q9H299 93 aa13.45□□□□□ -0.26
TRAPPC3-204ENST00000373166 NOP10Q9NPE3 64 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 978.1 ms