RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 GAGE12IP0CL82 117 aa14.4□□□□□ -0.11
MMP9-201ENST00000372330 GAGE4Q13068 117 aa14.4□□□□□ -0.11
MMP9-201ENST00000372330 IGFL3Q6UXB1 125 aa14.4□□□□□ -0.11
MMP9-201ENST00000372330 RPEQ96AT9 228 aa14.4□□□□□ -0.11
MMP9-201ENST00000372330 RPUSD1Q9UJJ7 312 aaKnown RBP14.4□□□□□ -0.11
MMP9-201ENST00000372330 FAM215AQ9Y5M1 114 aa14.4□□□□□ -0.11
MMP9-201ENST00000372330 TRAV40A0A0B4J280 105 aa14.39□□□□□ -0.11
MMP9-201ENST00000372330 LHBP01229 141 aa14.39□□□□□ -0.11
MMP9-201ENST00000372330 Q71RC1 249 aaPredicted RBP14.39□□□□□ -0.11
MMP9-201ENST00000372330 OR4C13Q8NGP0 309 aa14.39□□□□□ -0.11
MMP9-201ENST00000372330 CARD19Q96LW7 228 aa14.38□□□□□ -0.11
MMP9-201ENST00000372330 CITED1Q99966 193 aa14.38□□□□□ -0.11
MMP9-201ENST00000372330 CEP250Q9BV73 2442 aa14.38□□□□□ -0.11
MMP9-201ENST00000372330 SMKR1H3BMG3 65 aa14.38□□□□□ -0.11
MMP9-201ENST00000372330 RBP4P02753 201 aa14.38□□□□□ -0.11
MMP9-201ENST00000372330 PLNP26678 52 aa14.38□□□□□ -0.11
MMP9-201ENST00000372330 IGLV3-9A0A075B6K5 115 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 TRBV19A0A075B6N1 114 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 RHODO00212 210 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 SPRY3O43610 288 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 NHLRC4P0CG21 123 aaPredicted RBP14.37□□□□□ -0.11
MMP9-201ENST00000372330 RPL32P62910 135 aaKnown RBP14.37□□□□□ -0.11
MMP9-201ENST00000372330 C3orf36Q3SXR2 165 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 K7EM74 188 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 GVINP1Q7Z2Y8 2422 aa14.37□□□□□ -0.11
MMP9-201ENST00000372330 SBSPONQ8IVN8 264 aa14.36□□□□□ -0.11
MMP9-201ENST00000372330 SCNM1Q9BWG6 230 aa14.36□□□□□ -0.11
MMP9-201ENST00000372330 MRPL35Q9NZE8 188 aaKnown RBP14.36□□□□□ -0.11
MMP9-201ENST00000372330 TRBV20-1A0A075B6N2 111 aa14.36□□□□□ -0.11
MMP9-201ENST00000372330 MYMXA0A1B0GTQ4 84 aa14.36□□□□□ -0.11
MMP9-201ENST00000372330 PSMB2P49721 201 aa14.36□□□□□ -0.11
MMP9-201ENST00000372330 MYOZ3Q8TDC0 251 aa14.36□□□□□ -0.11
MMP9-201ENST00000372330 MRPL20Q9BYC9 149 aaKnown RBP14.36□□□□□ -0.11
MMP9-201ENST00000372330 A0A087WX48 190 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 GATA4P43694 442 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 PLGLAQ15195 96 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 C10orf55Q5SWW7 151 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 NGBQ9NPG2 151 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 SMG1Q96Q15 3661 aaKnown RBP14.35□□□□□ -0.11
MMP9-201ENST00000372330 RP1L1Q8IWN7 2480 aaPredicted RBP14.35□□□□□ -0.11
MMP9-201ENST00000372330 ATMQ13315 3056 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 A0A1W2PPI3 338 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 ASIPP42127 132 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 UBE2D3P61077 147 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 UBE2D2P62837 147 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 FAM201AQ5SY85 155 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 SIGLEC15Q6ZMC9 328 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 COX8CQ7Z4L0 72 aa14.35□□□□□ -0.11
MMP9-201ENST00000372330 AGRNO00468 2067 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 FAM90A27PA6NNH2 459 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 A8MWV9 139 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 TNFRSF6BO95407 300 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 LYZP61626 148 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 GAGE2BQ13066 116 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 GAGE2EQ4V326 116 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 GAGE2DQ9UEU5 116 aa14.34□□□□□ -0.11
MMP9-201ENST00000372330 NDUFV3P56181 108 aaKnown RBP14.33□□□□□ -0.11
MMP9-201ENST00000372330 Q8N8P6 123 aa14.33□□□□□ -0.11
MMP9-201ENST00000372330 TMSB15BA0A087X1C1 80 aa14.33□□□□□ -0.12
MMP9-201ENST00000372330 SH2D1AO60880 128 aa14.33□□□□□ -0.12
MMP9-201ENST00000372330 RUSC1-AS1Q66K80 236 aa14.33□□□□□ -0.12
MMP9-201ENST00000372330 SMIM20Q8N5G0 67 aa14.33□□□□□ -0.12
MMP9-201ENST00000372330 LOC107984156A0A0G2JMH3 177 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 ARL17AQ8IVW1 177 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 RNF185Q96GF1 192 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 RNF7Q9UBF6 113 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 PTPRZ1P23471 2315 aaPredicted RBP14.32□□□□□ -0.12
MMP9-201ENST00000372330 FABP5P3A8MUU1 101 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 VMA21Q3ZAQ7 101 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 C1orf122Q6ZSJ8 110 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 C8orf49Q96NF6 230 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 DCHS1Q96JQ0 3298 aa14.32□□□□□ -0.12
MMP9-201ENST00000372330 LINC01549A6NIU2 74 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 UBE2D1P51668 147 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 Q6Q795 121 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 PTH2Q96A98 100 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 FBXL15Q9H469 300 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 DSCAMO60469 2012 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 CNIH1O95406 144 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 CLEC3BP05452 202 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 IGLC6P0CF74 106 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 TNFAIP6P98066 277 aaPredicted RBP14.31□□□□□ -0.12
MMP9-201ENST00000372330 TTC32Q5I0X7 151 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 HCP5Q6MZN7 132 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 DUX4L9Q6RFH8 374 aaPredicted RBP14.31□□□□□ -0.12
MMP9-201ENST00000372330 C22orf34Q6ZV56 151 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 ASCL5Q7RTU5 278 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 CNFNQ9BYD5 112 aa14.31□□□□□ -0.12
MMP9-201ENST00000372330 IGLV2-23P01705 113 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 FAM27E3Q08E93 113 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 SPTBN2O15020 2390 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 CENPVL3A0A0U1RRI6 287 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 M0QXV9 152 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 SNCGO76070 127 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 IFITM1P13164 125 aa14.3□□□□□ -0.12
MMP9-201ENST00000372330 SRSF2Q01130 221 aaKnown RBP14.3□□□□□ -0.12
MMP9-201ENST00000372330 ASCL2Q99929 193 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms