RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 FER1L6-AS2Q96M78 137 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 A6NDN8 102 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 F8WDY8 70 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 IGLV1-44P01699 117 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 FABP2P12104 132 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 CSN1S1P47710 185 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 SEC11AP67812 179 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 TWIST1Q15672 202 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 C5orf47Q569G3 176 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 PTH2Q96A98 100 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 IFI27L1Q96BM0 104 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 SPAG8Q99932 426 aaPredicted RBP4.25□□□□□ -1.73
ATG4A-204ENST00000372246 C20orf78Q9BR46 151 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 KLK15Q9H2R5 256 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 TMEM160Q9NX00 188 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 RNF7Q9UBF6 113 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 PSG8Q9UQ74 426 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 SLC25A15Q9Y619 301 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 ABCA4P78363 2273 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 TNFRSF13BO14836 293 aaPredicted RBP4.25□□□□□ -1.73
ATG4A-204ENST00000372246 PRSS1P07477 247 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 EGR2P11161 476 aaPredicted RBP4.25□□□□□ -1.73
ATG4A-204ENST00000372246 COX7A1P24310 79 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 CKS2P33552 79 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 HSD52Q0P140 79 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 ERCC8Q13216 396 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF833PQ6ZTB9 187 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 CHAC1Q9BUX1 264 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 HIGD1AQ9Y241 93 aa4.25□□□□□ -1.73
ATG4A-204ENST00000372246 TRBV25-1A0A075B6N4 114 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 IGHV3-49A0A0A0MS15 119 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 TRAV40A0A0B4J280 105 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 GAGE12HA6NDE8 117 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 SIVA1O15304 175 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 SH2D1AO60880 128 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 IGKV1-17P01599 117 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 LEPP41159 167 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 EFNA4P52798 201 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 FHL3Q13643 280 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 ANXA2RQ3ZCQ2 193 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF575Q86XF7 245 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 TDHQ8IZJ6 230 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 THAP8Q8NA92 274 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 OR4C13Q8NGP0 309 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 TMEM167AQ8TBQ9 72 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 FOXC2Q99958 501 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 VGLL1Q99990 258 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF492Q9P255 531 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 AKAP6Q13023 2319 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 LY6HO94772 140 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 NDUFA3O95167 84 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 IGHG4P01861 327 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 TRGV3P03979 118 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 IL4P05112 153 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 SMIM13P0DJ93 91 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 SIGLEC15Q6ZMC9 328 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 C8orf46Q8TAG6 207 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 OSR1Q8TAX0 266 aaPredicted RBP4.24□□□□□ -1.73
ATG4A-204ENST00000372246 PHLDA1Q8WV24 401 aaPredicted RBP4.24□□□□□ -1.73
ATG4A-204ENST00000372246 MRAP2Q96G30 205 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 SPANXB1Q9NS25 103 aaPredicted RBP4.24□□□□□ -1.73
ATG4A-204ENST00000372246 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
ATG4A-204ENST00000372246 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 TMEM8BA6NDV4 472 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 K7EM74 188 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 EMP1P54849 157 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 PAX8Q06710 450 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 RIGQ13278 110 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 FAM104BQ5XKR9 115 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 RNF182Q8N6D2 247 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.23□□□□□ -1.73
ATG4A-204ENST00000372246 SIGMAR1Q99720 223 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 PROCRQ9UNN8 238 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 U3KQE9 123 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 HRNRQ86YZ3 2850 aaPredicted RBP4.23□□□□□ -1.73
ATG4A-204ENST00000372246 TMEM189A5PLL7 270 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 TEX22C9J3V5 150 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 HBDP02042 147 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 SMIM17P0DL12 118 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 RPL27AP46776 148 aaKnown RBP4.23□□□□□ -1.73
ATG4A-204ENST00000372246 DEFB1P60022 68 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 PLGLAQ15195 96 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 ORMDL3Q8N138 153 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 TMEM158Q8WZ71 300 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 RASL11BQ9BPW5 248 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
ATG4A-204ENST00000372246 MRPL35Q9NZE8 188 aaKnown RBP4.23□□□□□ -1.73
ATG4A-204ENST00000372246 PRSS29PA6NIE9 313 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 IGLL5B9A064 214 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 ORM1P02763 201 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 SUB1P53999 127 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATG4A-204ENST00000372246 RPL32P62910 135 aaKnown RBP4.22□□□□□ -1.73
ATG4A-204ENST00000372246 LGALS9BQ3B8N2 356 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 LGALS9CQ6DKI2 356 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 GFRA4Q9GZZ7 299 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 GEMIN7Q9H840 131 aaKnown RBP4.22□□□□□ -1.73
ATG4A-204ENST00000372246 OTORQ9NRC9 128 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms