RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 COL8A2P25067 703 aa11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 Q6ZUT4 128 aa11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 DEFB121Q5J5C9 76 aa11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 TRPT1Q86TN4 253 aaKnown RBP11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 PRCDQ00LT1 54 aa11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
RAPGEF1-202ENST00000372190 IGKV1D-8A0A087WSZ0 117 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 BUB3O43684 328 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 PFN2P35080 140 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 MORN2Q502X0 79 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 SIGLEC15Q6ZMC9 328 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 IGLL5B9A064 214 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 F5H768 121 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 M0R1W7 72 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 LY6HO94772 140 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 IGLC1P0CG04 106 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 TMEM219Q86XT9 240 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 ATP6V0E2Q8NHE4 81 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 RALGAPA1Q6GYQ0 2036 aa11.35□□□□□ -0.59
RAPGEF1-202ENST00000372190 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 SCN8AQ9UQD0 1980 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 TRAV3A0A0B4J244 114 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 SRRM5B3KS81 715 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 H3BUX3 64 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 PFN1P07737 140 aaKnown RBP11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
RAPGEF1-202ENST00000372190 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 CRYGCP07315 174 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 SRSF7Q16629 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 CR1LQ2VPA4 569 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 RPP25LQ8N5L8 163 aaKnown RBP11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 WISP1O95388 367 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 IGHV1-8P0DP01 117 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 LHFPL1Q86WI0 220 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 LYRM9A8MSI8 78 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
RAPGEF1-202ENST00000372190 H3BQ85 93 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 MSMBP08118 114 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 TPRP12270 2363 aaKnown RBP11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 PMS2P5A8MQ11 134 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 Q6ZVH6 145 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 PI4KAP42356 2102 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 RP1P56715 2156 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 J3QQQ9 107 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 F8VRH5 84 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 NDUFB1O75438 58 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 GATA3P23771 443 aa11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 SUPT4H1P63272 117 aaKnown RBP11.32□□□□□ -0.6
RAPGEF1-202ENST00000372190 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 CNOT1A5YKK6 2376 aaKnown RBP11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 DNAJC13O75165 2243 aa11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 ATP5EP56381 51 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 C22orf46C9J442 243 aa11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 RNF114Q9Y508 228 aa11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 GBF1Q92538 1859 aa11.31□□□□□ -0.6
RAPGEF1-202ENST00000372190 CFPP27918 469 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 PDE6HQ13956 83 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 THAP8Q8NA92 274 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 NREPQ16612 68 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 C3orf22Q8N5N4 141 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 MRPL35Q9NZE8 188 aaKnown RBP11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF1-202ENST00000372190 TRGV1A0A0A0MS02 117 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 C3orf36Q3SXR2 165 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 WFDC2Q14508 124 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 Q86TA4 180 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 GAFA1Q96PS6 74 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 HS3ST6Q96QI5 342 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 I3L3M4 83 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 CD177Q8N6Q3 437 aa11.29□□□□□ -0.6
RAPGEF1-202ENST00000372190 UBE2BP63146 152 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms