RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 C17orf77Q96MU5 243 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 ATP5J2P56134 94 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 WDR86Q86TI4 376 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 CHCHD5Q9BSY4 110 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 H3BMM0 161 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 ZNF503Q96F45 646 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 GGNQ86UU5 652 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 ZNF492Q9P255 531 aa9.43□□□□□ -0.9
PTPN1-201ENST00000371621 FAM90A9PA6NNJ1 464 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 TMEM14BQ9NUH8 114 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 THADAQ6YHU6 1953 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 PRRG2O14669 202 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 SPRY2O43597 315 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 CT83Q5H943 113 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 SPATA25Q9BR10 227 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 FAM236AA0A1B0GUQ0 79 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 FAM236BA0A1B0GV22 79 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 E9PLD3 99 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 ECSCRQ19T08 205 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 SIT1Q9Y3P8 196 aa9.42□□□□□ -0.9
PTPN1-201ENST00000371621 ATXN8Q156A1 80 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 MBD6Q96DN6 1003 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 COL4A4P53420 1690 aaPredicted RBP9.41□□□□□ -0.9
PTPN1-201ENST00000371621 PINLYPA6NC86 204 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 SRRM4A7MD48 611 aaKnown RBP9.41□□□□□ -0.9
PTPN1-201ENST00000371621 VWC2LB2RUY7 222 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 PRO1854Q9UHT4 67 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 CECR9P0C854 216 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 HIST1H4AP62805 103 aaKnown RBP9.41□□□□□ -0.9
PTPN1-201ENST00000371621 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
PTPN1-201ENST00000371621 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
PTPN1-201ENST00000371621 C5orf64Q2M2E5 130 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 NUP37Q8NFH4 326 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 PATE3B3GLJ2 98 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 COLCA1Q6ZS62 124 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 TRANK1O15050 2925 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 DUX3Q96PT4 197 aa9.4□□□□□ -0.9
PTPN1-201ENST00000371621 IGLV3-12A0A075B6K2 115 aa9.4□□□□□ -0.91
PTPN1-201ENST00000371621 IGKV3-20P01619 116 aa9.4□□□□□ -0.91
PTPN1-201ENST00000371621 PMS2CLQ68D20 193 aa9.4□□□□□ -0.91
PTPN1-201ENST00000371621 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.91
PTPN1-201ENST00000371621 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.91
PTPN1-201ENST00000371621 EPOPA6NHQ4 379 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 DNAL4O96015 105 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 FRYLO94915 3013 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 BRWD1-AS2P59051 145 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 PATE2Q6UY27 113 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 A0A1B0GXF2 115 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 ADARB2-AS1A8MUL3 147 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 IQCF6A8MYZ5 107 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 M0R2P5 195 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 MFAP4P55083 255 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 IL17RELQ6ZVW7 336 aa9.39□□□□□ -0.91
PTPN1-201ENST00000371621 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
PTPN1-201ENST00000371621 ERCC8Q13216 396 aa9.38□□□□□ -0.91
PTPN1-201ENST00000371621 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
PTPN1-201ENST00000371621 ZNF474Q6S9Z5 364 aaPredicted RBP9.38□□□□□ -0.91
PTPN1-201ENST00000371621 FAM57AQ8TBR7 257 aa9.38□□□□□ -0.91
PTPN1-201ENST00000371621 Q8TCH9 128 aa9.38□□□□□ -0.91
PTPN1-201ENST00000371621 F8VRH5 84 aa9.38□□□□□ -0.91
PTPN1-201ENST00000371621 MAPKAPK5-AS1Q8N8E1 139 aa9.38□□□□□ -0.91
PTPN1-201ENST00000371621 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 C5orf67F2Z3F1 127 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 ODF1Q14990 250 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 SP5Q6BEB4 398 aaPredicted RBP9.37□□□□□ -0.91
PTPN1-201ENST00000371621 WDFY4Q6ZS81 3184 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 CELSR3Q9NYQ7 3312 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 DUX4L9Q6RFH8 374 aaPredicted RBP9.37□□□□□ -0.91
PTPN1-201ENST00000371621 A0A1W2PPI3 338 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 TCL1BO95988 128 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 C2orf66Q6UXQ4 117 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
PTPN1-201ENST00000371621 IGHV1-2P23083 117 aa9.36□□□□□ -0.91
PTPN1-201ENST00000371621 TAL2Q16559 108 aa9.36□□□□□ -0.91
PTPN1-201ENST00000371621 MRPL14Q6P1L8 145 aaKnown RBP9.36□□□□□ -0.91
PTPN1-201ENST00000371621 DDB2Q92466 427 aa9.36□□□□□ -0.91
PTPN1-201ENST00000371621 SPXQ9BT56 116 aa9.36□□□□□ -0.91
PTPN1-201ENST00000371621 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
PTPN1-201ENST00000371621 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
PTPN1-201ENST00000371621 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
PTPN1-201ENST00000371621 PTPN13Q12923 2485 aa9.35□□□□□ -0.91
PTPN1-201ENST00000371621 PRSS46E5RG02 174 aa9.35□□□□□ -0.91
PTPN1-201ENST00000371621 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 CD7P09564 240 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 ASIPP42127 132 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 CARD19Q96LW7 228 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 ZNF576Q9H609 170 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 NUP210Q8TEM1 1887 aaPredicted RBP9.34□□□□□ -0.91
PTPN1-201ENST00000371621 DUX5Q96PT3 197 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.91
PTPN1-201ENST00000371621 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms