RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 FOXC2Q99958 501 aa9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 ZFP2Q6ZN57 461 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 Q6ZUT4 128 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 ZNF672Q499Z4 452 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 Q6ZQT7 251 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 C1QTNF4Q9BXJ3 329 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 COLQQ9Y215 455 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 CEACAM4O75871 244 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 TWIST1Q15672 202 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
SMARCA1-201ENST00000371121 TRGV3P03979 118 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 MZT1Q08AG7 82 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 C5orf64Q2M2E5 130 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 IGFBPL1Q8WX77 278 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 ZNF48Q96MX3 618 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 SIGLEC9Q9Y336 463 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 SMAD5-AS1Q9Y6J3 95 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 GLRXP35754 106 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 LINC00311Q8N616 119 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 FAM169BQ8N8A8 192 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 NRACQ8N912 160 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 PRR25Q96S07 402 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 PROCRQ9UNN8 238 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 SIT1Q9Y3P8 196 aa9.05□□□□□ -0.96
SMARCA1-201ENST00000371121 M0R1B8 84 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 TMEM160Q9NX00 188 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 SRSF6Q13247 344 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 C11orf21Q9P2W6 132 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 S4R3C0 116 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 APOMO95445 188 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 TNFAIP6P98066 277 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 KLRD1Q13241 179 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 TMEM30BQ3MIR4 351 aa9.04□□□□□ -0.96
SMARCA1-201ENST00000371121 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 DPM2O94777 84 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 CCL8P80075 99 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 SPINK8P0C7L1 97 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 RPL27AP46776 148 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 EFNA4P52798 201 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 C8orf31Q8N9H6 132 aa9.03□□□□□ -0.96
SMARCA1-201ENST00000371121 CD40P25942 277 aa9.02□□□□□ -0.96
SMARCA1-201ENST00000371121 LOXP28300 417 aaPredicted RBP9.02□□□□□ -0.96
SMARCA1-201ENST00000371121 TAL2Q16559 108 aa9.02□□□□□ -0.96
SMARCA1-201ENST00000371121 DTX2Q86UW9 622 aa9.02□□□□□ -0.96
SMARCA1-201ENST00000371121 UBE2D3P61077 147 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 UBE2D2P62837 147 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 KIR2DL4Q99706 377 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 AKAP13Q12802 2813 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 PRSS1P07477 247 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 LGALS1P09382 135 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 PLEKHB2Q96CS7 222 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 RASL11BQ9BPW5 248 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 SS18L2Q9UHA2 77 aa9.02□□□□□ -0.97
SMARCA1-201ENST00000371121 RNF223E7ERA6 249 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 COX6B1P14854 86 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 UBE2D1P51668 147 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 Q6ZS92 163 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 ZGRF1Q86YA3 2104 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 ATP6V0E2Q8NHE4 81 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 MAP1LC3AQ9H492 121 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 A0A087WX48 190 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 LINC01619G3V211 115 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 IL4P05112 153 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 CD7P09564 240 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 VMA21Q3ZAQ7 101 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 RNF125Q96EQ8 232 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 SCNM1Q9BWG6 230 aa9.01□□□□□ -0.97
SMARCA1-201ENST00000371121 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 PRAC2D3DTV9 90 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 NDUFA3O95167 84 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 PPP1R27Q86WC6 154 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 AJUBAQ96IF1 538 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 CITED1Q99966 193 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 CRYBG3Q68DQ2 2970 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 ENSAO43768 121 aaKnown RBP9□□□□□ -0.97
SMARCA1-201ENST00000371121 IGLV1-47P01700 117 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 IGHV1-8P0DP01 117 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 Q8N8P6 123 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 FBXL15Q9H469 300 aa9□□□□□ -0.97
SMARCA1-201ENST00000371121 HIST1H4GQ99525 98 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 CYSLTR1Q9Y271 337 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 IGHV7-4-1A0A0J9YVY3 117 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 OR11H12B2RN74 326 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 OR11H1Q8NG94 326 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 OR11H2Q8NH07 326 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 CFHR4Q92496 578 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 ERCC8Q13216 396 aa8.99□□□□□ -0.97
SMARCA1-201ENST00000371121 TMEM155Q4W5P6 130 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms