RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 UBE2G2P60604 165 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 FLI1Q01543 452 aaPredicted RBP11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 RNF183Q96D59 192 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 RCHY1Q96PM5 261 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 YTHDF2Q9Y5A9 579 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 A0A1B0GV50 99 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 TSPOP30536 169 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 DEFB135Q30KP9 77 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 SLC35B3Q9H1N7 401 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 MANBALQ9NQG1 85 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 EPDR1Q9UM22 224 aa11.36□□□□□ -0.59
PRPF38B-202ENST00000370022 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 K7EQM0 130 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 SPRY2O43597 315 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 IFNA7P01567 189 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 TCRAP04437 139 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 CDKN1BP46527 198 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 PMS2P11Q13670 270 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 XCL2Q9UBD3 114 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 AGRNO00468 2067 aa11.35□□□□□ -0.59
PRPF38B-202ENST00000370022 FBLL1A6NHQ2 334 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 PCP4L1A6NKN8 68 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 GATCO43716 136 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 PAGE4O60829 102 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 CT45A10P0DMU9 189 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 PRB4P10163 310 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 LEPP41159 167 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 ERCC8Q13216 396 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 SPINK13Q1W4C9 94 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 GOLT1AQ6ZVE7 132 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 CSNK1G2-AS1Q8NCQ2 148 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 HIST1H2BAQ96A08 127 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 VGLL1Q99990 258 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 ATG101Q9BSB4 218 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 ZNF492Q9P255 531 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 RPH3ALQ9UNE2 315 aa11.34□□□□□ -0.59
PRPF38B-202ENST00000370022 F6UZH7 168 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 IFNA1P01562 189 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 NMBP08949 121 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 ZNF138P52744 262 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 FXYD7P58549 80 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 ZNF680Q8NEM1 530 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 IGF2BP2-AS1Q96M15 143 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 TXNDC17Q9BRA2 123 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 M0R2Z0 102 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 INSP01308 110 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 TAGLN2P37802 199 aaKnown RBP11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 GNG5P63218 68 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 CCL20P78556 96 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 LYPD6BQ8NI32 183 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 GNG13Q9P2W3 67 aa11.33□□□□□ -0.6
PRPF38B-202ENST00000370022 CRXO43186 299 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 CRISP2P16562 243 aa11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 RETNQ9HD89 108 aa11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
PRPF38B-202ENST00000370022 PEX7O00628 323 aa11.31□□□□□ -0.6
PRPF38B-202ENST00000370022 ATP5G3P48201 142 aa11.31□□□□□ -0.6
PRPF38B-202ENST00000370022 RARRES2Q99969 163 aa11.31□□□□□ -0.6
PRPF38B-202ENST00000370022 U3KQK5 164 aa11.31□□□□□ -0.6
PRPF38B-202ENST00000370022 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
PRPF38B-202ENST00000370022 ZNF705AQ6ZN79 300 aaPredicted RBP11.3□□□□□ -0.6
PRPF38B-202ENST00000370022 TRAV12-2A0A075B6T6 113 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 KLLNB2CW77 178 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 F8W036 122 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 OR11H2Q8NH07 326 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 NEU1Q99519 415 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 NDFIP1Q9BT67 221 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 MED9Q9NWA0 146 aa11.29□□□□□ -0.6
PRPF38B-202ENST00000370022 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 GPX1P07203 203 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 BCL2P10415 239 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 Q8TAT8 98 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 VAX2Q9UIW0 290 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 DNAH9Q9NYC9 4486 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 MIFP14174 115 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 FMC1Q96HJ9 113 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 TMEM208Q9BTX3 173 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms