RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MLXQ9UH92 298 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
PHGDH-202ENST00000369409 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
PHGDH-202ENST00000369409 CYSRT1A8MQ03 144 aa12.69□□□□□ -0.38
PHGDH-202ENST00000369409 M0QZ24 198 aa12.69□□□□□ -0.38
PHGDH-202ENST00000369409 GATCO43716 136 aaKnown RBP12.69□□□□□ -0.38
PHGDH-202ENST00000369409 ADAMTSL5Q6ZMM2 481 aa12.69□□□□□ -0.38
PHGDH-202ENST00000369409 OR9G4Q8NGQ1 327 aa12.69□□□□□ -0.38
PHGDH-202ENST00000369409 PEMTQ9UBM1 199 aa12.69□□□□□ -0.38
PHGDH-202ENST00000369409 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-202ENST00000369409 RPS10P46783 165 aaKnown RBP12.68□□□□□ -0.38
PHGDH-202ENST00000369409 FHL3Q13643 280 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 C2CD3Q4AC94 2353 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 C19orf71A6NCJ1 209 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 CCL24O00175 119 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 FOXL1Q12952 345 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 DCANP1Q8TF63 244 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 PRR25Q96S07 402 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 GPR61Q9BZJ8 451 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
PHGDH-202ENST00000369409 TFPI2P48307 235 aa12.67□□□□□ -0.38
PHGDH-202ENST00000369409 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
PHGDH-202ENST00000369409 P01737 135 aa12.66□□□□□ -0.38
PHGDH-202ENST00000369409 TCL1AP56279 114 aa12.66□□□□□ -0.38
PHGDH-202ENST00000369409 DEFB1P60022 68 aa12.66□□□□□ -0.38
PHGDH-202ENST00000369409 DAZAP1Q96EP5 407 aaKnown RBP12.66□□□□□ -0.38
PHGDH-202ENST00000369409 ZNF705DP0CH99 300 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-202ENST00000369409 ZNF705BP0CI00 300 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-202ENST00000369409 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 SAMD13Q5VXD3 122 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
PHGDH-202ENST00000369409 ID1P41134 155 aa12.65□□□□□ -0.38
PHGDH-202ENST00000369409 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 CSN3P07498 182 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 CRIP1P50238 77 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 ZFP82Q8N141 532 aa12.64□□□□□ -0.39
PHGDH-202ENST00000369409 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 OVOL1O14753 267 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 ZNF138P52744 262 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 NPIPB6E9PJ23 425 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 F6UB75 175 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 K7EQG2 157 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 ZNF688P0C7X2 276 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 COX8CQ7Z4L0 72 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 DYNLRB2Q8TF09 96 aa12.63□□□□□ -0.39
PHGDH-202ENST00000369409 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
PHGDH-202ENST00000369409 TYMSP04818 313 aa12.62□□□□□ -0.39
PHGDH-202ENST00000369409 HIST1H1AQ02539 215 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-202ENST00000369409 CT83Q5H943 113 aa12.62□□□□□ -0.39
PHGDH-202ENST00000369409 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
PHGDH-202ENST00000369409 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
PHGDH-202ENST00000369409 SH2D1AO60880 128 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 ZNF80P51504 273 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-202ENST00000369409 RPL19P84098 196 aaKnown RBP12.61□□□□□ -0.39
PHGDH-202ENST00000369409 PSMG4Q5JS54 123 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-202ENST00000369409 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 OR2D3Q8NGH3 330 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 TSKUQ8WUA8 353 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 NEU1Q99519 415 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 SPINK4O60575 86 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 RAB5BP61020 215 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
PHGDH-202ENST00000369409 S100A12P80511 92 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 TMEM61Q8N0U2 210 aa12.61□□□□□ -0.39
PHGDH-202ENST00000369409 A0A1B0GUS0 222 aa12.6□□□□□ -0.39
PHGDH-202ENST00000369409 A8MWL6 223 aa12.6□□□□□ -0.39
PHGDH-202ENST00000369409 TRGC2P03986 189 aa12.6□□□□□ -0.39
PHGDH-202ENST00000369409 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
PHGDH-202ENST00000369409 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 GZMBP10144 247 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 RBPMS2Q6ZRY4 209 aaKnown RBP12.59□□□□□ -0.39
PHGDH-202ENST00000369409 NDUFA11Q86Y39 141 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 LURAP1LQ8IV03 231 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 NAT8BQ9UHF3 227 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 NUP35Q8NFH5 326 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 LINC00477Q96M19 166 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
PHGDH-202ENST00000369409 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.4
PHGDH-202ENST00000369409 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
PHGDH-202ENST00000369409 MRPL54Q6P161 138 aaKnown RBP12.58□□□□□ -0.4
PHGDH-202ENST00000369409 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
PHGDH-202ENST00000369409 FRMD6-AS1P0C7T7 363 aa12.57□□□□□ -0.4
PHGDH-202ENST00000369409 CD300EQ496F6 205 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-202ENST00000369409 LENEPQ9Y5L5 61 aa12.57□□□□□ -0.4
PHGDH-202ENST00000369409 NIPBLQ6KC79 2804 aaeCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms