RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 AGPAT4-IT1Q9H0P7 198 aa7.05□□□□□ -1.28
CD48-202ENST00000368046 DKK2Q9UBU2 259 aa7.05□□□□□ -1.28
CD48-202ENST00000368046 TNFSF18Q9UNG2 199 aa7.05□□□□□ -1.28
CD48-202ENST00000368046 CELA1Q9UNI1 258 aa7.05□□□□□ -1.28
CD48-202ENST00000368046 PLECQ15149 4684 aaKnown RBP7.05□□□□□ -1.28
CD48-202ENST00000368046 FXYD6-FXYD2A0A087WZ82 144 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 DEFB131BA0A096LNP1 70 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 RNF222A6NCQ9 220 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 IGLL5B9A064 214 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 H7BYZ3 331 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 MBP02144 154 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 PRM2P04554 102 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 AZU1P20160 251 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 LEPP41159 167 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 RANP62826 216 aaKnown RBP7.04□□□□□ -1.28
CD48-202ENST00000368046 KHDC3LQ587J8 217 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 FAM222AQ5U5X8 452 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 C9orf47Q6ZRZ4 202 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 HSD17B11Q8NBQ5 300 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 OR2G3Q8NGZ4 309 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 PSMG3Q9BT73 122 aaPredicted RBP7.04□□□□□ -1.28
CD48-202ENST00000368046 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
CD48-202ENST00000368046 YTHDF2Q9Y5A9 579 aaKnown RBP7.04□□□□□ -1.28
CD48-202ENST00000368046 SACSQ9NZJ4 4579 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 LY6G6CO95867 125 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 NMBP08949 121 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 HTN1P15515 57 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 ATP6V0CP27449 155 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 CSN1S1P47710 185 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 RAB2AP61019 212 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 ERCC8Q13216 396 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 KIR3DS1Q14943 382 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 FAM122CQ6P4D5 195 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 PQLC2Q6ZP29 291 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 ZNF493Q6ZR52 646 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 ZNF767PQ75MW2 155 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 RXFP4Q8TDU9 374 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 LINC00476Q8WZB0 136 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 GNPNAT1Q96EK6 184 aaPredicted RBP7.03□□□□□ -1.28
CD48-202ENST00000368046 PHYHIPLQ96FC7 376 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 NIPSNAP3BQ9BS92 247 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 APLNQ9ULZ1 77 aa7.03□□□□□ -1.28
CD48-202ENST00000368046 BORCS7-ASMTA0A0B4J1R7 106 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 LYRM9A8MSI8 78 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 G3V3Q6 166 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 TAAR5O14804 337 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 SLC25A5P05141 298 aaKnown RBP7.02□□□□□ -1.29
CD48-202ENST00000368046 UBE2L3P68036 154 aaKnown RBP7.02□□□□□ -1.29
CD48-202ENST00000368046 TMEM78Q5T7P6 136 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 GFI1BQ5VTD9 330 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 RPL7L1Q6DKI1 246 aaKnown RBP7.02□□□□□ -1.29
CD48-202ENST00000368046 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 CCDC28AQ8IWP9 274 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 ARL6IP6Q8N6S5 226 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 FAM19A4Q96LR4 140 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 Q9H3A6 140 aa7.02□□□□□ -1.29
CD48-202ENST00000368046 RYR2Q92736 4967 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
CD48-202ENST00000368046 TRAV12-3A0A0B4J271 114 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 TRBV7-9A0A0J9YWB2 115 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 RBAKDNA6NC62 111 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 PGPA6NDG6 321 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 J3KRW8 73 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 ZNF324O75467 553 aaPredicted RBP7.01□□□□□ -1.29
CD48-202ENST00000368046 EIF3GO75821 320 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD48-202ENST00000368046 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
CD48-202ENST00000368046 GPX1P07203 203 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 STAG3L2P0CL84 134 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 STAG3L3P0CL85 134 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 CRISP2P16562 243 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 CDC34P49427 236 aaPredicted RBP7.01□□□□□ -1.29
CD48-202ENST00000368046 DAD1P61803 113 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 FAM74A1Q5RGS3 127 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 RAB24Q969Q5 203 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 C16orf74Q96GX8 76 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 FAM210BQ96KR6 192 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 VGLL1Q99990 258 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 ZNF492Q9P255 531 aa7.01□□□□□ -1.29
CD48-202ENST00000368046 TIMM8BQ9Y5J9 83 aaPredicted RBP7.01□□□□□ -1.29
CD48-202ENST00000368046 LYSTQ99698 3801 aa7□□□□□ -1.29
CD48-202ENST00000368046 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
CD48-202ENST00000368046 IGHV4-4A0A075B6R2 117 aa7□□□□□ -1.29
CD48-202ENST00000368046 PLAC8L1A1L4L8 177 aa7□□□□□ -1.29
CD48-202ENST00000368046 KLLNB2CW77 178 aa7□□□□□ -1.29
CD48-202ENST00000368046 HMGB3O15347 200 aaKnown RBP7□□□□□ -1.29
CD48-202ENST00000368046 ARPC5O15511 151 aa7□□□□□ -1.29
CD48-202ENST00000368046 ZNF138P52744 262 aa7□□□□□ -1.29
CD48-202ENST00000368046 SUN5Q8TC36 379 aa7□□□□□ -1.29
CD48-202ENST00000368046 TMEM263Q8WUH6 116 aaKnown RBP7□□□□□ -1.29
CD48-202ENST00000368046 HYLS1Q96M11 299 aa7□□□□□ -1.29
CD48-202ENST00000368046 PYGO2Q9BRQ0 406 aa7□□□□□ -1.29
CD48-202ENST00000368046 ACTR3CQ9C0K3 210 aaPredicted RBP7□□□□□ -1.29
CD48-202ENST00000368046 SH3BGRL3Q9H299 93 aa7□□□□□ -1.29
CD48-202ENST00000368046 OTORQ9NRC9 128 aa7□□□□□ -1.29
CD48-202ENST00000368046 CYTL1Q9NRR1 136 aa7□□□□□ -1.29
CD48-202ENST00000368046 C7orf71A4D174 169 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 CBY3A6NI87 242 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 HMSDA8MTL9 139 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 DIRC3C9JPN6 131 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 DEFB130BP0DP73 79 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms