RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 C5orf17Q8NAS9 161 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 ODF3Q96PU9 254 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 VGLL1Q99990 258 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 AGPAT4-IT1Q9H0P7 198 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 PLA2G2EQ9NZK7 142 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 DNAH9Q9NYC9 4486 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 A0A1W2PRE2 83 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 RBAKDNA6NC62 111 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 DEFB4AO15263 64 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 HBE1P02100 147 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 ZNF138P52744 262 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 GNG5P63218 68 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 CST9LP1Q5W188 147 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 LINC01587Q99440 93 aa13.92□□□□□ -0.18
HLA-DRB1-201ENST00000360004 IGHV4-28A0A0C4DH34 117 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 ZNF705EA8MWA4 302 aaPredicted RBP13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 GPX1P07203 203 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 SULT1A2P50226 295 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 Q8TAT8 98 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 MBD3L1Q8WWY6 194 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 NIPSNAP3BQ9BS92 247 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 NKX6-2Q9C056 277 aaPredicted RBP13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 EDA2RQ9HAV5 297 aa13.91□□□□□ -0.18
HLA-DRB1-201ENST00000360004 SERTM2A0A1B0GWG4 89 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 SMIM9A6NGZ8 99 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 HTN1P15515 57 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 PPT1P50897 306 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 RRN3P1Q2M238 152 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 ZNF705AQ6ZN79 300 aaPredicted RBP13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 TMEM256Q8N2U0 113 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 ARL6IP6Q8N6S5 226 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 IL17DQ8TAD2 202 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 ZNF492Q9P255 531 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 YTHDF2Q9Y5A9 579 aaKnown RBP13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 X6R8D5 127 aa13.9□□□□□ -0.18
HLA-DRB1-201ENST00000360004 TENM3Q9P273 2699 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 GGTLC3B5MD39 225 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 CRXO43186 299 aaPredicted RBP13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 RNASE4P34096 147 aaKnown RBP13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 GFI1BQ5VTD9 330 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 ALKAL2Q6UX46 152 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 C1orf158Q8N1D5 194 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 NDFIP1Q9BT67 221 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 C11orf68Q9H3H3 251 aaKnown RBP13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 EPDR1Q9UM22 224 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TRAV12-3A0A0B4J271 114 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 FAM74A7A6NL05 159 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 F6UZH7 168 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TCRAP04437 139 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 EMP1P54849 157 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 CYB561D1Q8N8Q1 229 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 NEU1Q99519 415 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 C20orf144Q9BQM9 153 aa13.88□□□□□ -0.19
HLA-DRB1-201ENST00000360004 C7orf71A4D174 169 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TMEM189A5PLL7 270 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 PAGE4O60829 102 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 Q8NAQ8 132 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 MUC7Q8TAX7 377 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 ATG101Q9BSB4 218 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 STAB2Q8WWQ8 2551 aa13.87□□□□□ -0.19
HLA-DRB1-201ENST00000360004 LOC102723971A0A1B0GUV8 181 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 ZNF705GA8MUZ8 300 aaPredicted RBP13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 H7BYZ3 331 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 KIR3DS1Q14943 382 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 CCDC28AQ8IWP9 274 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 SGK494Q96LW2 274 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 GNG13Q9P2W3 67 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TRAV8-1A0A0A6YYK1 113 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 PEX7O00628 323 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 IFNA1P01562 189 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 NMBP08949 121 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 CRISP2P16562 243 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 BTN1A1Q13410 526 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 C11orf45Q8TAV5 145 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 LENEPQ9Y5L5 61 aa13.85□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 CXorf65A6NEN9 183 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 RBMY1A1P0DJD3 496 aaKnown RBP13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 RBMY1CP0DJD4 496 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TAS2R60P59551 318 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 BLOC1S1P78537 153 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 PMS2P11Q13670 270 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 RBMY1FQ15415 496 aaKnown RBP13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 HIST1H2BAQ96A08 127 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 TREM1Q9NP99 234 aa13.84□□□□□ -0.19
HLA-DRB1-201ENST00000360004 HUWE1Q7Z6Z7 4374 aaKnown RBP13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 KLLNB2CW77 178 aa13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 RGS13O14921 159 aa13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 ATP5G3P48201 142 aa13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 UBE2G1P62253 170 aa13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 FLI1Q01543 452 aaPredicted RBP13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 ZFAND6Q6FIF0 208 aa13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 TMEM75Q8N9X5 138 aa13.83□□□□□ -0.2
HLA-DRB1-201ENST00000360004 FAM19A4Q96LR4 140 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms