RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 ERCC8Q13216 396 aa17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 TMEM78Q5T7P6 136 aa17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 ZNF705AQ6ZN79 300 aaPredicted RBP17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 C5orf17Q8NAS9 161 aa17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 FAM19A4Q96LR4 140 aa17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 ARL2-SNX15V9GYD0 113 aa17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 FAM74A7A6NL05 159 aa17.63■□□□□ 0.41
ALKAL1-201ENST00000358543 GGTLC3B5MD39 225 aa17.63■□□□□ 0.41
ALKAL1-201ENST00000358543 LEPP41159 167 aa17.63■□□□□ 0.41
ALKAL1-201ENST00000358543 EDA2RQ9HAV5 297 aa17.63■□□□□ 0.41
ALKAL1-201ENST00000358543 TRBV7-9A0A0J9YWB2 115 aa17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 SERTM2A0A1B0GWG4 89 aa17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 NEU1Q99519 415 aa17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 ZNF492Q9P255 531 aa17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 GOLT1BQ9Y3E0 138 aa17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 YTHDF2Q9Y5A9 579 aaKnown RBP17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 X6R8D5 127 aa17.62■□□□□ 0.41
ALKAL1-201ENST00000358543 INSP01308 110 aa17.61■□□□□ 0.41
ALKAL1-201ENST00000358543 NMBP08949 121 aa17.61■□□□□ 0.41
ALKAL1-201ENST00000358543 C1orf158Q8N1D5 194 aa17.61■□□□□ 0.41
ALKAL1-201ENST00000358543 EPDR1Q9UM22 224 aa17.61■□□□□ 0.41
ALKAL1-201ENST00000358543 TRAV12-2A0A075B6T6 113 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 TEX46H3BTG2 121 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 TCRAP04437 139 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 MIFP14174 115 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 CRISP2P16562 243 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 PPT1P50897 306 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 ZNF138P52744 262 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 UBE2G2P60604 165 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 C20orf144Q9BQM9 153 aa17.6■□□□□ 0.41
ALKAL1-201ENST00000358543 SMIM9A6NGZ8 99 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 HBE1P02100 147 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 GNG5P63218 68 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 ALKAL2Q6UX46 152 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 GOLT1AQ6ZVE7 132 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 WWC2-AS2Q96NR7 200 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 RPH3ALQ9UNE2 315 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 LENEPQ9Y5L5 61 aa17.59■□□□□ 0.41
ALKAL1-201ENST00000358543 A0A1B0GV50 99 aa17.58■□□□□ 0.4
ALKAL1-201ENST00000358543 KLLNB2CW77 178 aa17.58■□□□□ 0.4
ALKAL1-201ENST00000358543 TCEAL7Q9BRU2 100 aa17.58■□□□□ 0.4
ALKAL1-201ENST00000358543 K7EQM0 130 aa17.57■□□□□ 0.4
ALKAL1-201ENST00000358543 CCDC28AQ8IWP9 274 aa17.57■□□□□ 0.4
ALKAL1-201ENST00000358543 TMEM256Q8N2U0 113 aa17.57■□□□□ 0.4
ALKAL1-201ENST00000358543 Q8NAQ8 132 aa17.57■□□□□ 0.4
ALKAL1-201ENST00000358543 ATG101Q9BSB4 218 aa17.57■□□□□ 0.4
ALKAL1-201ENST00000358543 C11orf68Q9H3H3 251 aaKnown RBP17.57■□□□□ 0.4
ALKAL1-201ENST00000358543 IFNA7P01567 189 aa17.56■□□□□ 0.4
ALKAL1-201ENST00000358543 KIR3DS1Q14943 382 aa17.56■□□□□ 0.4
ALKAL1-201ENST00000358543 GFI1BQ5VTD9 330 aa17.56■□□□□ 0.4
ALKAL1-201ENST00000358543 CYB561D1Q8N8Q1 229 aa17.56■□□□□ 0.4
ALKAL1-201ENST00000358543 HIST1H2BAQ96A08 127 aa17.56■□□□□ 0.4
ALKAL1-201ENST00000358543 TMEM208Q9BTX3 173 aa17.56■□□□□ 0.4
ALKAL1-201ENST00000358543 IGHV3OR16-12A0A075B7B8 117 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 A0A0J9YWU9 116 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 FBLL1A6NHQ2 334 aaKnown RBP17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 PAGE4O60829 102 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 RBMY1A1P0DJD3 496 aaKnown RBP17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 RBMY1CP0DJD4 496 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 CCL20P78556 96 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 PMS2P11Q13670 270 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 RBMY1FQ15415 496 aaKnown RBP17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 CST9LP1Q5W188 147 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 ZFAND2AQ8N6M9 145 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 DNAH7Q8WXX0 4024 aa17.55■□□□□ 0.4
ALKAL1-201ENST00000358543 GPX1P07203 203 aa17.54■□□□□ 0.4
ALKAL1-201ENST00000358543 BLOC1S1P78537 153 aa17.54■□□□□ 0.4
ALKAL1-201ENST00000358543 TMEM75Q8N9X5 138 aa17.54■□□□□ 0.4
ALKAL1-201ENST00000358543 Q8TAT8 98 aa17.54■□□□□ 0.4
ALKAL1-201ENST00000358543 MANBALQ9NQG1 85 aa17.54■□□□□ 0.4
ALKAL1-201ENST00000358543 IGHV4-28A0A0C4DH34 117 aa17.53■□□□□ 0.4
ALKAL1-201ENST00000358543 H7BYZ3 331 aa17.53■□□□□ 0.4
ALKAL1-201ENST00000358543 LINC01587Q99440 93 aa17.53■□□□□ 0.4
ALKAL1-201ENST00000358543 TRAV8-1A0A0A6YYK1 113 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 C7orf71A4D174 169 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 F6UZH7 168 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 J3KRW8 73 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 PEX7O00628 323 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 IGLV2-11P01706 119 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 TAS2R60P59551 318 aa17.52■□□□□ 0.4
ALKAL1-201ENST00000358543 ATP5G3P48201 142 aa17.51■□□□□ 0.39
ALKAL1-201ENST00000358543 RRN3P1Q2M238 152 aa17.51■□□□□ 0.39
ALKAL1-201ENST00000358543 TXNDC17Q9BRA2 123 aa17.51■□□□□ 0.39
ALKAL1-201ENST00000358543 NIPSNAP3BQ9BS92 247 aa17.51■□□□□ 0.39
ALKAL1-201ENST00000358543 TRAV12-3A0A0B4J271 114 aa17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 TMEM189A5PLL7 270 aa17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 ZNF324O75467 553 aaPredicted RBP17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 RNASE4P34096 147 aaKnown RBP17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 FLI1Q01543 452 aaPredicted RBP17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 LYPD6BQ8NI32 183 aa17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 GNG13Q9P2W3 67 aa17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 PSG8Q9UQ74 426 aa17.5■□□□□ 0.39
ALKAL1-201ENST00000358543 BTN1A1Q13410 526 aa17.49■□□□□ 0.39
ALKAL1-201ENST00000358543 PRR9Q5T870 116 aa17.49■□□□□ 0.39
ALKAL1-201ENST00000358543 TEX261Q6UWH6 196 aa17.49■□□□□ 0.39
ALKAL1-201ENST00000358543 TVP23CQ96ET8 276 aa17.49■□□□□ 0.39
ALKAL1-201ENST00000358543 SGK494Q96LW2 274 aa17.49■□□□□ 0.39
ALKAL1-201ENST00000358543 C11orf94C9JXX5 98 aa17.48■□□□□ 0.39
ALKAL1-201ENST00000358543 DEFB4AO15263 64 aa17.48■□□□□ 0.39
ALKAL1-201ENST00000358543 LINC00479Q96M42 142 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms