RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LYNX1G3V0Z9 82 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 LYNX1P0DP58 116 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 LOXL1Q08397 574 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 ADIPOQQ15848 244 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 LGALS9BQ3B8N2 356 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 ANXA2RQ3ZCQ2 193 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 KLF17Q5JT82 389 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 TEX36Q5VZQ5 186 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 LGALS9CQ6DKI2 356 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 TMEM133Q9H2Q1 129 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGHV3OR16-8A0A075B7F1 116 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 TMEM213A2RRL7 107 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 CACNG7P62955 275 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 RIGQ13278 110 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 TRGV9Q99603 122 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 LINC00574Q9H8X3 128 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 SPTBN1Q01082 2364 aaKnown RBP6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 D6R8Y8 96 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 IL4P05112 153 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 PLA2G2CQ5R387 149 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 LCNL1Q6ZST4 164 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 PPP1R27Q86WC6 154 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 AMN1Q8IY45 258 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 OTORQ9NRC9 128 aa6.51□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGHV3-35A0A0C4DH35 117 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 NPIPB5A8MRT5 1133 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 NPIPB6E9PJ23 425 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 SMKR1H3BMG3 65 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 TMEM178BH3BS89 294 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 K7EM74 188 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 SCGB2A1O75556 95 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGHV1-8P0DP01 117 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 TMEM30BQ3MIR4 351 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 CT83Q5H943 113 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 ATP6V0E2Q8NHE4 81 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 GLMPQ8WWB7 406 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 C8orf49Q96NF6 230 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 SPXQ9BT56 116 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 CHAC1Q9BUX1 264 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 SIGLEC9Q9Y336 463 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 FABP5P3A8MUU1 101 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 HAX1O00165 279 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 LOXP28300 417 aaPredicted RBP6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 RPEQ96AT9 228 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 GFRA4Q9GZZ7 299 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 RAB1BQ9H0U4 201 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 HIGD1BQ9P298 99 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 AGRNO00468 2067 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 C16orf97H3BN30 126 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGHV3-23P01764 117 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 NHLRC4P0CG21 123 aaPredicted RBP6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 FHL3Q13643 280 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGFL4Q6B9Z1 124 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 PIP4P2Q8N4L2 257 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 NGBQ9NPG2 151 aa6.5□□□□□ -1.37
CDC42SE1-201ENST00000357235 K7EMI3 77 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGLV2-11P01706 119 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 ATP5J2P56134 94 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 HES1Q14469 280 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 CEND1Q8N111 149 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 PF4V1P10720 104 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGFL2Q6UWQ7 119 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 SCNM1Q9BWG6 230 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 VCX2Q9H322 139 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 ARHGAP32A7KAX9 2087 aa6.49□□□□□ -1.37
CDC42SE1-201ENST00000357235 ANKRD11Q6UB99 2663 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 TWIST1Q15672 202 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 MRGPRG-AS1Q2M3A8 158 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 Q8TAT8 98 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 LRBAP50851 2863 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 TRBV19A0A075B6N1 114 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 TRBV20-1A0A075B6N2 111 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGKV2-40A0A087WW87 121 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGHV1-3A0A0C4DH29 117 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGKV1-17P01599 117 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 IGKV2D-40P01614 121 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 CRIP1P50238 77 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 NFE4Q86UQ8 179 aa6.48□□□□□ -1.37
CDC42SE1-201ENST00000357235 AKAP6Q13023 2319 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 A0A087WX48 190 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 PRTN3P24158 256 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 CKS2P33552 79 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 RRN3P1Q2M238 152 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 C12orf74Q32Q52 190 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 TTC32Q5I0X7 151 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 RNF125Q96EQ8 232 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 AAMDCQ9H7C9 122 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 ONECUT1Q9UBC0 465 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 ZNF785A8K8V0 405 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 M0QXV9 152 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 NDUFV3P56181 108 aaKnown RBP6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 GAGE2BQ13066 116 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms