RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 HOXD3P31249 432 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-202ENST00000357162 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 NDUFA4L2Q9NRX3 87 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 IGKV3-15P01624 115 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 TRAV12-1A0A0B4J245 112 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 LOC101059948A0A1B0GTJ6 334 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 EGR1P18146 543 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 CRYBA4P53673 196 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 C17orf82Q86X59 251 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-202ENST00000357162 PTPRSQ13332 1948 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 RAI1Q7Z5J4 1906 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-202ENST00000357162 IGKV1-12A0A0C4DH73 117 aa5.34□□□□□ -1.56
VPS13B-202ENST00000357162 IGKV1D-12P01611 117 aa5.34□□□□□ -1.56
VPS13B-202ENST00000357162 SH2D6Q7Z4S9 175 aa5.34□□□□□ -1.56
VPS13B-202ENST00000357162 C20orf204Q6ZNR8 217 aa5.34□□□□□ -1.56
VPS13B-202ENST00000357162 FAM240AA0A1B0GVK7 77 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 A0A1W2PPI3 338 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 NPSP0C0P6 89 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 IGHV1-8P0DP01 117 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 CRIM1Q9NZV1 1036 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 A0A087WX48 190 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 PMS2P5A8MQ11 134 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 NDUFC1O43677 76 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 IGKV1D-33P01593 117 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 IGKV1-33P01594 117 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 NPC2P61916 151 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 LSM4Q9Y4Z0 139 aaKnown RBP5.33□□□□□ -1.56
VPS13B-202ENST00000357162 FAM90A27PA6NNH2 459 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 J3QQQ9 107 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 SPAG8Q99932 426 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-202ENST00000357162 SIGLEC9Q9Y336 463 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 IGLL1P15814 213 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 C11orf44Q8N8P7 122 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 RNASE6Q93091 150 aaKnown RBP5.33□□□□□ -1.56
VPS13B-202ENST00000357162 ZNF747Q9BV97 191 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 EDA2RQ9HAV5 297 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 hADV29S1A0JD25 119 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 DEPPQ9NTK1 212 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 SRRM4A7MD48 611 aaKnown RBP5.33□□□□□ -1.56
VPS13B-202ENST00000357162 TMEM158Q8WZ71 300 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 TEX15Q9BXT5 2789 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 CD55P08174 381 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 KAAG1Q9UBP8 84 aa5.33□□□□□ -1.56
VPS13B-202ENST00000357162 NPIPB5A8MRT5 1133 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 I3L3M4 83 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 IGLV3-1P01715 115 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 PYYP10082 97 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 ATP5J2P56134 94 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 LRP4O75096 1905 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 SH2D1AO60880 128 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 IGKV1-27A0A075B6S5 117 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 FOXG1P55316 489 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-202ENST00000357162 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 PIFOQ8TCI5 191 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 ZNF319Q9P2F9 582 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 LILRA1O75019 489 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 MED14OSP0DP75 135 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 CSRP1P21291 193 aaKnown RBP5.32□□□□□ -1.56
VPS13B-202ENST00000357162 GNG5P63218 68 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 TSSC4Q9Y5U2 329 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-202ENST00000357162 FHL1Q13642 323 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 E9PLN8 166 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 SNAI2O43623 268 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 RNASE1P07998 156 aaKnown RBP5.32□□□□□ -1.56
VPS13B-202ENST00000357162 HTN1P15515 57 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 PRTN3P24158 256 aa5.32□□□□□ -1.56
VPS13B-202ENST00000357162 TRGV2A0A075B6R0 118 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 PAX4O43316 350 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 IGLC7A0M8Q6 106 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 ADARB2-AS1A8MUL3 147 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 CTRLP40313 264 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 LINC01587Q99440 93 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 NTF4P34130 210 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 BSPH1Q075Z2 132 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 RBMY1FQ15415 496 aaKnown RBP5.31□□□□□ -1.56
VPS13B-202ENST00000357162 CDKN1AP38936 164 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 PRIMA1Q86XR5 153 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 NDUFA12Q9UI09 145 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 JMJD7-PLA2G4BH0Y9G9 81 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 ZNF833PQ6ZTB9 187 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 Q6ZSR3 168 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 NCR2O95944 276 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 C12orf74Q32Q52 190 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 IGKV1D-43A0A0B4J1Z2 117 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 G3V4G9 280 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 IGHV1-2P23083 117 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 CRIPAKQ8N1N5 446 aa5.31□□□□□ -1.56
VPS13B-202ENST00000357162 PRR20EP86478 221 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 PRR20CP86479 221 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 PRR20DP86480 221 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 PRR20BP86481 221 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 PRR20AP86496 221 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 FAM219BQ5XKK7 198 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 GGNQ86UU5 652 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 FAM110DQ8TAY7 271 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-202ENST00000357162 FAM168AQ92567 244 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 DSCR8Q96T75 97 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 GTSCR1Q86UQ5 136 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms