RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF492Q9P255 531 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 BRWD3Q6RI45 1802 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 IGHV7-4-1A0A0J9YVY3 117 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1-5P01602 117 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 Q6ZSR3 168 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 NLRC5Q86WI3 1866 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 MPDZO75970 2070 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 SPTBN2O15020 2390 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1D-8A0A087WSZ0 117 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 ANGP03950 147 aaKnown RBP4.45□□□□□ -1.7
PTPRD-202ENST00000356435 ARMS2P0C7Q2 107 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 PRSS46E5RG02 174 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 C8orf86Q6ZUL3 223 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 DMRTC2Q8IXT2 367 aaPredicted RBP4.44□□□□□ -1.7
PTPRD-202ENST00000356435 ZNRF2Q8NHG8 242 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 C1orf43Q9BWL3 253 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 OCIAD2Q56VL3 154 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 ZNF833PQ6ZTB9 187 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 COL4A6Q14031 1691 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 NBL1P41271 181 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 Q8N8P6 123 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 ATP6V0BQ99437 205 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 PNRC2Q9NPJ4 139 aaKnown RBP4.44□□□□□ -1.7
PTPRD-202ENST00000356435 SPTBN1Q01082 2364 aaKnown RBP4.44□□□□□ -1.7
PTPRD-202ENST00000356435 hADV29S1A0JD25 119 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 CCL18P55774 89 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 CHD3Q12873 2000 aaKnown RBP4.44□□□□□ -1.7
PTPRD-202ENST00000356435 NXPH4O95158 308 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 ESPL1Q14674 2120 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 TRAV13-2A0A0B4J235 113 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 ATG2BQ96BY7 2078 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 C5orf63A6NC05 138 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 Q0VG73 95 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 A0A1W2PPI3 338 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 UTF1Q5T230 341 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 C8orf49Q96NF6 230 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 TMEM14BQ9NUH8 114 aa4.44□□□□□ -1.7
PTPRD-202ENST00000356435 LINC01551Q86U37 167 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 RPP25LQ8N5L8 163 aaKnown RBP4.43□□□□□ -1.7
PTPRD-202ENST00000356435 DOCK11Q5JSL3 2073 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 SMKR1H3BMG3 65 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 RNF152Q8N8N0 203 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 OR11H6Q8NGC7 330 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 SDHAF1A6NFY7 115 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 CHKB-CPT1BH3BT56 60 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 RIF1Q5UIP0 2472 aaKnown RBP4.43□□□□□ -1.7
PTPRD-202ENST00000356435 F8W735 103 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-202ENST00000356435 C2orf66Q6UXQ4 117 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 PLA2G2EQ9NZK7 142 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 A0A096LPF7 62 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1-39P01597 117 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1D-39P04432 117 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 HOXB4P17483 251 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-202ENST00000356435 C11orf1Q9H5F2 150 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 G3V318 75 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 ZNF503Q96F45 646 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 C16orf74Q96GX8 76 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 POLR2AP24928 1970 aaKnown RBP4.43□□□□□ -1.7
PTPRD-202ENST00000356435 ATRXP46100 2492 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 TRBV19A0A075B6N1 114 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1-16P04430 117 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 HLA-DRB4P13762 266 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 FOXL2NBQ6ZUU3 175 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 HLA-DRB4X5D2U9 266 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 AKAP6Q13023 2319 aa4.43□□□□□ -1.7
PTPRD-202ENST00000356435 H3BRN7 92 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 FOXE3Q13461 319 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 PRR31Q5SQ13 230 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 TMEM14CQ9P0S9 112 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 KMT2EQ8IZD2 1858 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 CACNA1DQ01668 2161 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 WISP1O95388 367 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 ZC2HC1BQ5TFG8 222 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 TEX36Q5VZQ5 186 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 CITED2Q99967 270 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-202ENST00000356435 DOCK6Q96HP0 2047 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 CACNA1BQ00975 2339 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 IGHV3-38A0A0C4DH36 116 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 ETDCA0A1B0GVM5 59 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 FAM231BA6NCW3 169 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 TRAV12-2A0A075B6T6 113 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 A0A0J9YY99 117 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 K7EP13 123 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 GP9P14770 177 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 NDUFA4L2Q9NRX3 87 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 POLR3KQ9Y2Y1 108 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-202ENST00000356435 IGHG4P01861 327 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 C4orf48Q5BLP8 95 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 MRPL36Q9P0J6 103 aaKnown RBP4.42□□□□□ -1.7
PTPRD-202ENST00000356435 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 NTF4P34130 210 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 STPG4Q8N801 248 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 TM2D2Q9BX73 214 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms