RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RPRMLQ8N4K4 120 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 ESM1Q9NQ30 184 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 ZNF106Q9H2Y7 1883 aaKnown RBP13.99□□□□□ -0.17
COL27A1-201ENST00000356083 GPR179Q6PRD1 2367 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 TRGV9Q99603 122 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 M0R1W7 72 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 I3L3M4 83 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 HEPN1Q6WQI6 88 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 NEGR1Q7Z3B1 354 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 H0YJW9 148 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 C5orf24Q7Z6I8 188 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 MAJINQ3KP22 176 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 TREML4Q6UXN2 200 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 MRPS18CQ9Y3D5 142 aaKnown RBP13.98□□□□□ -0.17
COL27A1-201ENST00000356083 DENND4CQ5VZ89 1909 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 PRSS57Q6UWY2 283 aa13.98□□□□□ -0.17
COL27A1-201ENST00000356083 PKIGQ9Y2B9 76 aa13.97□□□□□ -0.17
COL27A1-201ENST00000356083 ETDCA0A1B0GVM5 59 aa13.97□□□□□ -0.17
COL27A1-201ENST00000356083 G3V318 75 aa13.97□□□□□ -0.17
COL27A1-201ENST00000356083 FGF6P10767 208 aa13.97□□□□□ -0.17
COL27A1-201ENST00000356083 ATP6V0E1O15342 81 aa13.97□□□□□ -0.17
COL27A1-201ENST00000356083 RNF183Q96D59 192 aa13.97□□□□□ -0.17
COL27A1-201ENST00000356083 TIRAPP58753 221 aa13.96□□□□□ -0.17
COL27A1-201ENST00000356083 AGMATQ9BSE5 352 aa13.96□□□□□ -0.17
COL27A1-201ENST00000356083 ATRAIDQ6UW56 229 aa13.96□□□□□ -0.17
COL27A1-201ENST00000356083 CFHR4Q92496 578 aa13.96□□□□□ -0.17
COL27A1-201ENST00000356083 RNF126Q9BV68 326 aa13.96□□□□□ -0.17
COL27A1-201ENST00000356083 NEUROG3Q9Y4Z2 214 aa13.96□□□□□ -0.17
COL27A1-201ENST00000356083 UBE2AP49459 152 aa13.96□□□□□ -0.18
COL27A1-201ENST00000356083 IGKV1D-12P01611 117 aa13.96□□□□□ -0.18
COL27A1-201ENST00000356083 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 COL4A1P02462 1669 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 CD177Q8N6Q3 437 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 C1orf43Q9BWL3 253 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 E7EQL1 145 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BKO60814 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BJP06899 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BOP23527 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BBP33778 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BDP58876 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BCP62807 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST2H2BEQ16778 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BHQ93079 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BNQ99877 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 HIST1H2BMQ99879 126 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 GLRX5Q86SX6 157 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 PLSCR4Q9NRQ2 329 aa13.95□□□□□ -0.18
COL27A1-201ENST00000356083 SHISA9B4DS77 424 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 A0A087WV48 116 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 CD59P13987 128 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 DEFB136Q30KP8 78 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 IGHV3-30P01768 117 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 IGHV3-33P01772 117 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 IGHV3-30-3P0DP02 117 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 IGHV3-30-5P0DP03 117 aa13.94□□□□□ -0.18
COL27A1-201ENST00000356083 LINC00271P0C7V0 271 aa13.93□□□□□ -0.18
COL27A1-201ENST00000356083 A0A0A6YYD4 124 aa13.93□□□□□ -0.18
COL27A1-201ENST00000356083 CCL18P55774 89 aa13.93□□□□□ -0.18
COL27A1-201ENST00000356083 ZNF124Q15973 351 aa13.93□□□□□ -0.18
COL27A1-201ENST00000356083 GREM1O60565 184 aa13.93□□□□□ -0.18
COL27A1-201ENST00000356083 TM2D2Q9BX73 214 aa13.93□□□□□ -0.18
COL27A1-201ENST00000356083 A0A1B0GUS0 222 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 IGKV1-16P04430 117 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 MUC6Q6W4X9 2439 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 CCL24O00175 119 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 MYO18BQ8IUG5 2567 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 RHODO00212 210 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 SYS1-DBNDD2H3BUS1 97 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 NTF4P34130 210 aa13.92□□□□□ -0.18
COL27A1-201ENST00000356083 IGHV4OR15-8A0A075B7B6 117 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 A0A087WW49 117 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 WFDC1Q9HC57 220 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 TMEM213A2RRL7 107 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
COL27A1-201ENST00000356083 A0A1B0GTI1 187 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 C5orf38Q86SI9 138 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 COL4A5P29400 1685 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 LMO1P25800 156 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 FANCD2OSQ96PS1 177 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 AMBPP02760 352 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 TEX36Q5VZQ5 186 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 FBLIM1Q8WUP2 373 aa13.91□□□□□ -0.18
COL27A1-201ENST00000356083 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-201ENST00000356083 CDKN1BP46527 198 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 SRRM5B3KS81 715 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-201ENST00000356083 FAM104BQ5XKR9 115 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 BOD1L2Q8IYS8 172 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 CD200R1LQ6Q8B3 271 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 IGKV1-9A0A0C4DH69 117 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 IL18BPO95998 194 aa13.9□□□□□ -0.18
COL27A1-201ENST00000356083 C9orf47Q6ZRZ4 202 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 HIST1H2BLQ99880 126 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 CXCL1P09341 107 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 HGFACQ04756 655 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms