RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ZNF48Q96MX3 618 aaPredicted RBP15.17■□□□□ 0.02
COL13A1-201ENST00000354547 MINOS1-NBL1R4GNA1 71 aa15.17■□□□□ 0.02
COL13A1-201ENST00000354547 BPESC1Q9GZL8 116 aa15.17■□□□□ 0.02
COL13A1-201ENST00000354547 A0A096LNJ9 63 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 SCGB2A1O75556 95 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 NPYP01303 97 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 SCRT2Q9NQ03 307 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 GAS8-AS1O95177 125 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 LINC01545Q5VT33 79 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 ZNF493Q6ZR52 646 aa15.16■□□□□ 0.02
COL13A1-201ENST00000354547 CBY3A6NI87 242 aa15.15■□□□□ 0.02
COL13A1-201ENST00000354547 C1orf122Q6ZSJ8 110 aa15.15■□□□□ 0.02
COL13A1-201ENST00000354547 NHLH1Q02575 133 aa15.15■□□□□ 0.02
COL13A1-201ENST00000354547 ORAOV1Q8WV07 137 aa15.15■□□□□ 0.02
COL13A1-201ENST00000354547 EBI3Q14213 229 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 VAMP3Q15836 100 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 IL17RELQ6ZVW7 336 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 ITPR1Q14643 2758 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 DTX2Q86UW9 622 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 ZNF502Q8TBZ5 544 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 C18orf15Q96N68 181 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 BMI1P35226 326 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 PRSS57Q6UWY2 283 aa15.14■□□□□ 0.01
COL13A1-201ENST00000354547 OOSP1A8MZH6 123 aa15.13■□□□□ 0.01
COL13A1-201ENST00000354547 EVI2AP22794 236 aa15.13■□□□□ 0.01
COL13A1-201ENST00000354547 UCNP55089 124 aa15.13■□□□□ 0.01
COL13A1-201ENST00000354547 CACNG7P62955 275 aa15.13■□□□□ 0.01
COL13A1-201ENST00000354547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL13A1-201ENST00000354547 IGHV2-70DA0A0C4DH43 119 aa15.13■□□□□ 0.01
COL13A1-201ENST00000354547 GATD1Q8NB37 220 aa15.13■□□□□ 0.01
COL13A1-201ENST00000354547 BVES-AS1Q5T3Y7 98 aa15.12■□□□□ 0.01
COL13A1-201ENST00000354547 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
COL13A1-201ENST00000354547 BUB3O43684 328 aa15.12■□□□□ 0.01
COL13A1-201ENST00000354547 GOSR1O95249 250 aa15.12■□□□□ 0.01
COL13A1-201ENST00000354547 FAM110DQ8TAY7 271 aaPredicted RBP15.12■□□□□ 0.01
COL13A1-201ENST00000354547 AJUBAQ96IF1 538 aa15.12■□□□□ 0.01
COL13A1-201ENST00000354547 CCDC140Q96MF4 163 aa15.12■□□□□ 0.01
COL13A1-201ENST00000354547 J3KRW8 73 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 GATA1P15976 413 aaPredicted RBP15.11■□□□□ 0.01
COL13A1-201ENST00000354547 UBE2E1P51965 193 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 FABP5P3A8MUU1 101 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 ANKRD39Q53RE8 183 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 Q6ZQT7 251 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 ZNF575Q86XF7 245 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 ZFAND3Q9H8U3 227 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 SELENOKQ9Y6D0 94 aa15.11■□□□□ 0.01
COL13A1-201ENST00000354547 UBE2V1Q13404 147 aa15.1■□□□□ 0.01
COL13A1-201ENST00000354547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.1■□□□□ 0.01
COL13A1-201ENST00000354547 UQCRFS1P47985 274 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 IGLC6P0CF74 106 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 BRD3OSQ6XYD6 125 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 U3KQK5 164 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 CLPSL1A2RUU4 121 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 HBDP02042 147 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 EFNA4P52798 201 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 MS4A6AQ9H2W1 248 aa15.09■□□□□ 0.01
COL13A1-201ENST00000354547 LMO4P61968 165 aa15.08■□□□□ 0
COL13A1-201ENST00000354547 AGPAT4-IT1Q9H0P7 198 aa15.08■□□□□ 0
COL13A1-201ENST00000354547 RPS20P60866 119 aaKnown RBP15.08■□□□□ 0
COL13A1-201ENST00000354547 C19orf84I3L1E1 186 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 TAX1BP3O14907 124 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 NPFFO15130 113 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 OR4C5Q8NGB2 326 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 TMEM190Q8WZ59 177 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 COL25A1Q9BXS0 654 aaPredicted RBP15.07■□□□□ 0
COL13A1-201ENST00000354547 COX8AP10176 69 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 C12orf54Q6X4T0 127 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 C11orf21Q9P2W6 132 aa15.07■□□□□ 0
COL13A1-201ENST00000354547 CENPVL3A0A0U1RRI6 287 aa15.06■□□□□ 0
COL13A1-201ENST00000354547 IFI27L1Q96BM0 104 aa15.06■□□□□ 0
COL13A1-201ENST00000354547 RNF185Q96GF1 192 aa15.06■□□□□ 0
COL13A1-201ENST00000354547 DKK2Q9UBU2 259 aa15.06■□□□□ 0
COL13A1-201ENST00000354547 EEF1AKMT3Q96AZ1 226 aa15.06■□□□□ 0
COL13A1-201ENST00000354547 METTL26Q96S19 204 aa15.06■□□□□ 0
COL13A1-201ENST00000354547 CELSR2Q9HCU4 2923 aa15.05■□□□□ 0
COL13A1-201ENST00000354547 SPRY2O43597 315 aa15.05■□□□□ 0
COL13A1-201ENST00000354547 NMUP48645 174 aa15.05■□□□□ 0
COL13A1-201ENST00000354547 HIST1H1AQ02539 215 aaPredicted RBP15.05■□□□□ 0
COL13A1-201ENST00000354547 C2orf91Q6ZV80 131 aa15.05■□□□□ 0
COL13A1-201ENST00000354547 IGKV3D-20A0A0C4DH25 116 aa15.05■□□□□ -0
COL13A1-201ENST00000354547 COX8CQ7Z4L0 72 aa15.05■□□□□ -0
COL13A1-201ENST00000354547 UFC1Q9Y3C8 167 aa15.05■□□□□ -0
COL13A1-201ENST00000354547 CSPG4Q6UVK1 2322 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 IGKV3-7A0A075B6H7 116 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 TRGV3P03979 118 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 LEPP41159 167 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 DEFB1P60022 68 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 TMEM78Q5T7P6 136 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 MAP1LC3AQ9H492 121 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 ABCA2Q9BZC7 2435 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 TRAV26-2A0A0B4J265 109 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 LY6EQ16553 131 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 C8orf86Q6ZUL3 223 aa15.04■□□□□ -0
COL13A1-201ENST00000354547 RNASE8Q8TDE3 154 aaKnown RBP15.04■□□□□ -0
COL13A1-201ENST00000354547 S100A7P31151 101 aa15.03■□□□□ -0
COL13A1-201ENST00000354547 CRYBG3Q68DQ2 2970 aa15.03■□□□□ -0
COL13A1-201ENST00000354547 AMMECR1LQ6DCA0 310 aa15.03■□□□□ -0
COL13A1-201ENST00000354547 TRAV8-2A0A0B4J237 113 aa15.03■□□□□ -0
COL13A1-201ENST00000354547 TNFRSF6BO95407 300 aa15.03■□□□□ -0
COL13A1-201ENST00000354547 ATP5G2Q06055 141 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms