RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
CAPN3-203ENST00000349748 EXOC3-AS1Q8N2X6 119 aa8.39□□□□□ -1.07
CAPN3-203ENST00000349748 PTPRBP23467 1997 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 NPFFO15130 113 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 IGLV2-11P01706 119 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 FOXC1Q12948 553 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 TRPT1Q86TN4 253 aaKnown RBP8.38□□□□□ -1.07
CAPN3-203ENST00000349748 Q8N1Y9 231 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 FAM57AQ8TBR7 257 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 MRPL36Q9P0J6 103 aaKnown RBP8.38□□□□□ -1.07
CAPN3-203ENST00000349748 CFAP47Q6ZTR5 3102 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 SS18L1O75177 396 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-203ENST00000349748 RNASE2P10153 161 aaKnown RBP8.38□□□□□ -1.07
CAPN3-203ENST00000349748 LIFP15018 202 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 PLGLB1Q02325 96 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 PCOLCEQ15113 449 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 ONECUT1Q9UBC0 465 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 ARFGEF3Q5TH69 2177 aa8.38□□□□□ -1.07
CAPN3-203ENST00000349748 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 CRIP1P50238 77 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 UBE2D1P51668 147 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 RTL8AQ9BWD3 113 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 CTSZQ9UBR2 303 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 ABCA1O95477 2261 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 PRRC2CQ9Y520 2896 aaKnown RBP8.37□□□□□ -1.07
CAPN3-203ENST00000349748 NAV3Q8IVL0 2385 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 LGALS1P09382 135 aaKnown RBP8.37□□□□□ -1.07
CAPN3-203ENST00000349748 CD7P09564 240 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 Q8IYB0 196 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 C15orf65H3BRN8 121 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 HERVK_113P63121 156 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 PRCDQ00LT1 54 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 C11orf53Q8IXP5 236 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 SIGLEC9Q9Y336 463 aa8.37□□□□□ -1.07
CAPN3-203ENST00000349748 IGKV1D-37A0A075B6S9 117 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 TRAV2A0A0B4J234 112 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 DUSP14O95147 198 aaKnown RBP8.36□□□□□ -1.07
CAPN3-203ENST00000349748 GATA1P15976 413 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-203ENST00000349748 C2orf83Q53S99 150 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 RUSC1-AS1Q66K80 236 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 PLEKHB2Q96CS7 222 aa8.36□□□□□ -1.07
CAPN3-203ENST00000349748 A0A1W2PNU3 283 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-203ENST00000349748 MRPL14Q6P1L8 145 aaKnown RBP8.36□□□□□ -1.07
CAPN3-203ENST00000349748 IL11RAQ14626 422 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 URB1O60287 2271 aaKnown RBP8.35□□□□□ -1.07
CAPN3-203ENST00000349748 J3KT08 172 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 ATP5LO75964 103 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 NDUFA7O95182 113 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 IGLC6P0CF74 106 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 EMP1P54849 157 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 B3GALT5-AS1P59052 145 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 HES1Q14469 280 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 LYRM7Q5U5X0 104 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 NDUFA11Q86Y39 141 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
CAPN3-203ENST00000349748 MFAP4P55083 255 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 GGNQ86UU5 652 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 F5H768 121 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 IGKV1-16P04430 117 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 GP9P14770 177 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 ZNF56Q15929 161 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-203ENST00000349748 FAM90A1Q86YD7 464 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 MSRB1Q9NZV6 116 aa8.34□□□□□ -1.07
CAPN3-203ENST00000349748 IGHV1-45A0A0A0MS14 117 aa8.34□□□□□ -1.08
CAPN3-203ENST00000349748 E7EUB6 86 aa8.34□□□□□ -1.08
CAPN3-203ENST00000349748 RFPL3SP0C7P2 107 aa8.34□□□□□ -1.08
CAPN3-203ENST00000349748 COX6A1P12074 109 aa8.34□□□□□ -1.08
CAPN3-203ENST00000349748 IMMP1LQ96LU5 166 aa8.34□□□□□ -1.08
CAPN3-203ENST00000349748 C8orf49Q96NF6 230 aa8.34□□□□□ -1.08
CAPN3-203ENST00000349748 DNPH1O43598 174 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 MRPL33O75394 65 aaKnown RBP8.33□□□□□ -1.08
CAPN3-203ENST00000349748 EFNA4P52798 201 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 NCOR2Q9Y618 2525 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 TM4SF5O14894 197 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 SAA2P0DJI9 122 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-203ENST00000349748 VKORC1Q9BQB6 163 aa8.33□□□□□ -1.08
CAPN3-203ENST00000349748 ZNF815PA8K554 130 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 H7C2G1 150 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 TIMM23O14925 209 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 MRPS12O15235 138 aaKnown RBP8.32□□□□□ -1.08
CAPN3-203ENST00000349748 LRRC75A-AS1Q8N1F1 130 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 CEP295Q9C0D2 2601 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 IGHV3-21A0A0B4J1V1 117 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 LINC01619G3V211 115 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 UPK2O00526 184 aa8.32□□□□□ -1.08
CAPN3-203ENST00000349748 TRGV11A0A075B6L2 103 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 IGHV3OR15-7A0A075B7D8 119 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms