RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 FER1L6-AS1Q8NA97 138 aa14.03□□□□□ -0.16
PTP4A3-202ENST00000349124 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
PTP4A3-202ENST00000349124 NHLH1Q02575 133 aa14.03□□□□□ -0.16
PTP4A3-202ENST00000349124 ECSCRQ19T08 205 aa14.03□□□□□ -0.16
PTP4A3-202ENST00000349124 FBXL19-AS1Q494R0 122 aa14.03□□□□□ -0.16
PTP4A3-202ENST00000349124 CLEC3BP05452 202 aa14.02□□□□□ -0.16
PTP4A3-202ENST00000349124 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.16
PTP4A3-202ENST00000349124 C11orf71Q6IPW1 123 aa14.02□□□□□ -0.16
PTP4A3-202ENST00000349124 PRSS57Q6UWY2 283 aa14.02□□□□□ -0.16
PTP4A3-202ENST00000349124 C12orf54Q6X4T0 127 aa14.02□□□□□ -0.16
PTP4A3-202ENST00000349124 CBY1Q9Y3M2 126 aa14.02□□□□□ -0.16
PTP4A3-202ENST00000349124 UQCRFS1P47985 274 aa14.02□□□□□ -0.17
PTP4A3-202ENST00000349124 RBX1P62877 108 aa14.02□□□□□ -0.17
PTP4A3-202ENST00000349124 SAPCD1Q5SSQ6 148 aa14.02□□□□□ -0.17
PTP4A3-202ENST00000349124 Q8N9W7 124 aa14.02□□□□□ -0.17
PTP4A3-202ENST00000349124 C18orf15Q96N68 181 aa14.02□□□□□ -0.17
PTP4A3-202ENST00000349124 ZNF207O43670 478 aaKnown RBP14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 PAX8Q06710 450 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 C15orf32Q32M92 178 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 Q6ZQT7 251 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 THYN1Q9P016 225 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 TRAV8-6A0A0B4J262 113 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 G3V318 75 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 HIST1H1AQ02539 215 aaPredicted RBP14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 ZNF48Q96MX3 618 aaPredicted RBP14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 NCOR2Q9Y618 2525 aa14.01□□□□□ -0.17
PTP4A3-202ENST00000349124 FGF6P10767 208 aa14□□□□□ -0.17
PTP4A3-202ENST00000349124 EVI2AP22794 236 aa14□□□□□ -0.17
PTP4A3-202ENST00000349124 CHD8Q9HCK8 2581 aa14□□□□□ -0.17
PTP4A3-202ENST00000349124 DKK2Q9UBU2 259 aa14□□□□□ -0.17
PTP4A3-202ENST00000349124 IGLC6P0CF74 106 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 PCP4P48539 62 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 RNF185Q96GF1 192 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 PSMG3-AS1Q96PY0 264 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 IL17RELQ6ZVW7 336 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 S100A7AQ86SG5 101 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 NAA38Q9BRA0 125 aaKnown RBP13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 SPTBN4Q9H254 2564 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 CCDC144NLQ6NUI1 221 aa13.99□□□□□ -0.17
PTP4A3-202ENST00000349124 COX8CQ7Z4L0 72 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 HIVEP3Q5T1R4 2406 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 ATP6V0E1O15342 81 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 HBDP02042 147 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 CLEC19AQ6UXS0 136 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 PCP2Q8IVA1 136 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 IFI27L1Q96BM0 104 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 AJUBAQ96IF1 538 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 C11orf21Q9P2W6 132 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 RAXQ9Y2V3 346 aa13.98□□□□□ -0.17
PTP4A3-202ENST00000349124 K7EP13 123 aa13.97□□□□□ -0.17
PTP4A3-202ENST00000349124 BMI1P35226 326 aa13.97□□□□□ -0.17
PTP4A3-202ENST00000349124 EBI3Q14213 229 aa13.97□□□□□ -0.17
PTP4A3-202ENST00000349124 CD5LO43866 347 aa13.97□□□□□ -0.17
PTP4A3-202ENST00000349124 RNF151Q2KHN1 245 aa13.97□□□□□ -0.17
PTP4A3-202ENST00000349124 TMEM97Q5BJF2 176 aa13.97□□□□□ -0.17
PTP4A3-202ENST00000349124 BUB3O43684 328 aa13.96□□□□□ -0.17
PTP4A3-202ENST00000349124 ZNF502Q8TBZ5 544 aa13.96□□□□□ -0.17
PTP4A3-202ENST00000349124 CLPSL1A2RUU4 121 aa13.96□□□□□ -0.18
PTP4A3-202ENST00000349124 FABP5P3A8MUU1 101 aa13.96□□□□□ -0.18
PTP4A3-202ENST00000349124 TTTY13Q9BZ97 58 aa13.96□□□□□ -0.18
PTP4A3-202ENST00000349124 ZFAND3Q9H8U3 227 aa13.96□□□□□ -0.18
PTP4A3-202ENST00000349124 LINC00527Q9UJ94 153 aa13.96□□□□□ -0.18
PTP4A3-202ENST00000349124 C7orf71A4D174 169 aa13.95□□□□□ -0.18
PTP4A3-202ENST00000349124 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
PTP4A3-202ENST00000349124 LGALS9CQ6DKI2 356 aa13.95□□□□□ -0.18
PTP4A3-202ENST00000349124 SIRPDQ9H106 197 aa13.95□□□□□ -0.18
PTP4A3-202ENST00000349124 NMUP48645 174 aa13.95□□□□□ -0.18
PTP4A3-202ENST00000349124 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.95□□□□□ -0.18
PTP4A3-202ENST00000349124 IGKV3D-20A0A0C4DH25 116 aa13.94□□□□□ -0.18
PTP4A3-202ENST00000349124 CCDC140Q96MF4 163 aa13.94□□□□□ -0.18
PTP4A3-202ENST00000349124 AGPAT4-IT1Q9H0P7 198 aa13.94□□□□□ -0.18
PTP4A3-202ENST00000349124 SAA4P35542 130 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 C1orf122Q6ZSJ8 110 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 SPRY2O43597 315 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 TRGV3P03979 118 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 LEPP41159 167 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 MINOS1Q5TGZ0 78 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 TMEM190Q8WZ59 177 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 MINOS1-NBL1R4GNA1 71 aa13.93□□□□□ -0.18
PTP4A3-202ENST00000349124 IGHV3OR16-10A0A075B7F0 116 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 TNFRSF6BO95407 300 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 RPS20P60866 119 aaKnown RBP13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 TM4SF20Q53R12 229 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 BOD1L2Q8IYS8 172 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 TRAV26-2A0A0B4J265 109 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 DTX2Q86UW9 622 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 TMEM219Q86XT9 240 aa13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 FAM110DQ8TAY7 271 aaPredicted RBP13.92□□□□□ -0.18
PTP4A3-202ENST00000349124 TRAV8-2A0A0B4J237 113 aa13.91□□□□□ -0.18
PTP4A3-202ENST00000349124 IGKV2D-26A0A0A0MRZ7 120 aa13.91□□□□□ -0.18
PTP4A3-202ENST00000349124 RAB37Q96AX2 223 aa13.91□□□□□ -0.18
PTP4A3-202ENST00000349124 MAP1LC3AQ9H492 121 aa13.91□□□□□ -0.18
PTP4A3-202ENST00000349124 CST9LQ9H4G1 147 aa13.91□□□□□ -0.18
PTP4A3-202ENST00000349124 OOSP1A8MZH6 123 aa13.9□□□□□ -0.18
PTP4A3-202ENST00000349124 J3KRW8 73 aa13.9□□□□□ -0.18
PTP4A3-202ENST00000349124 SMAD7O15105 426 aaKnown RBP13.9□□□□□ -0.18
PTP4A3-202ENST00000349124 IGF1P05019 195 aa13.9□□□□□ -0.18
PTP4A3-202ENST00000349124 UBTD1Q9HAC8 227 aa13.9□□□□□ -0.18
PTP4A3-202ENST00000349124 SPG11Q96JI7 2443 aa13.9□□□□□ -0.18
PTP4A3-202ENST00000349124 DEFB1P60022 68 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms