RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
PTBP1-201ENST00000349038 MYCNOSP40205 109 aa11.97□□□□□ -0.49
PTBP1-201ENST00000349038 KLF12Q9Y4X4 402 aa11.97□□□□□ -0.49
PTBP1-201ENST00000349038 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.49
PTBP1-201ENST00000349038 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.5
PTBP1-201ENST00000349038 IGHV3-66A0A0C4DH42 116 aa11.96□□□□□ -0.5
PTBP1-201ENST00000349038 LAMTOR5O43504 91 aa11.96□□□□□ -0.5
PTBP1-201ENST00000349038 TNFAIP6P98066 277 aaPredicted RBP11.96□□□□□ -0.5
PTBP1-201ENST00000349038 NFE4Q86UQ8 179 aa11.96□□□□□ -0.5
PTBP1-201ENST00000349038 ZNF785A8K8V0 405 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 SH2D1AO60880 128 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 SCGB1A1P11684 91 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 NBL1P41271 181 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 FOXI1Q12951 378 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
PTBP1-201ENST00000349038 E9PLD3 99 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 DPM2O94777 84 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 ODF1Q14990 250 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 CT83Q5H943 113 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 OR4C13Q8NGP0 309 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 FBXL15Q9H469 300 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 HIF1ANQ9NWT6 349 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 ASH1LQ9NR48 2969 aaKnown RBP11.95□□□□□ -0.5
PTBP1-201ENST00000349038 LHBP01229 141 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
PTBP1-201ENST00000349038 NCBP2LA6PVI3 153 aaKnown RBP11.94□□□□□ -0.5
PTBP1-201ENST00000349038 IGLV2-11P01706 119 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 COX7A1P24310 79 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 CD40P25942 277 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
PTBP1-201ENST00000349038 C8orf46Q8TAG6 207 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 OTORQ9NRC9 128 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 CTSZQ9UBR2 303 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 WI2-2373I1.2A0A1W2PRP0 233 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 HOXA3O43365 443 aaPredicted RBP11.94□□□□□ -0.5
PTBP1-201ENST00000349038 FHL3Q13643 280 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 TMEM164Q5U3C3 297 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 CUBNO60494 3623 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 SORL1Q92673 2214 aa11.94□□□□□ -0.5
PTBP1-201ENST00000349038 CCL11P51671 97 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 VMA21Q3ZAQ7 101 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 MYOZ3Q8TDC0 251 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 FSTL3O95633 263 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 IGHG3P01860 377 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 Q6ZUT4 128 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 HHLA3Q9XRX5 114 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
PTBP1-201ENST00000349038 RRN3P1Q2M238 152 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 KLHL30-AS1Q8NEE0 82 aa11.93□□□□□ -0.5
PTBP1-201ENST00000349038 SIVA1O15304 175 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
PTBP1-201ENST00000349038 NGBQ9NPG2 151 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 RNF7Q9UBF6 113 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 PROCRQ9UNN8 238 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 TRAV8-2A0A0B4J237 113 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 OR11H12B2RN74 326 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
PTBP1-201ENST00000349038 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 OR11H2Q8NH07 326 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
PTBP1-201ENST00000349038 ZNF883P0CG24 379 aa11.91□□□□□ -0.5
PTBP1-201ENST00000349038 LINC00574Q9H8X3 128 aa11.91□□□□□ -0.5
PTBP1-201ENST00000349038 C1QTNF4Q9BXJ3 329 aa11.91□□□□□ -0.5
PTBP1-201ENST00000349038 ERCC8Q13216 396 aa11.91□□□□□ -0.5
PTBP1-201ENST00000349038 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
PTBP1-201ENST00000349038 INS-IGF2F8WCM5 200 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 ZNF80P51504 273 aaPredicted RBP11.89□□□□□ -0.51
PTBP1-201ENST00000349038 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 SCNM1Q9BWG6 230 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 ZNF71Q9NQZ8 489 aaPredicted RBP11.89□□□□□ -0.51
PTBP1-201ENST00000349038 DKK4Q9UBT3 224 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 SLC25A15Q9Y619 301 aa11.89□□□□□ -0.51
PTBP1-201ENST00000349038 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
PTBP1-201ENST00000349038 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
PTBP1-201ENST00000349038 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
PTBP1-201ENST00000349038 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
PTBP1-201ENST00000349038 TRGV3P03979 118 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 HES1Q14469 280 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 TMEM30BQ3MIR4 351 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-201ENST00000349038 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-201ENST00000349038 Q1RN00 199 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 RAXQ9Y2V3 346 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 A0A1B0GW15 77 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 GATA4P43694 442 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 THAP8Q8NA92 274 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms