RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 IFNA1P01562 189 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 TSPOP30536 169 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 SUMO1P63165 101 aaKnown RBP13.73□□□□□ -0.21
CDHR4-201ENST00000343366 TMEM78Q5T7P6 136 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 SPATA25Q9BR10 227 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 TMPRSS5Q9H3S3 457 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 TRBV7-9A0A0J9YWB2 115 aa13.72□□□□□ -0.21
CDHR4-201ENST00000343366 FAM74A7A6NL05 159 aa13.72□□□□□ -0.21
CDHR4-201ENST00000343366 DIRC3C9JPN6 131 aa13.72□□□□□ -0.21
CDHR4-201ENST00000343366 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
CDHR4-201ENST00000343366 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
CDHR4-201ENST00000343366 LENEPQ9Y5L5 61 aa13.72□□□□□ -0.21
CDHR4-201ENST00000343366 AGRNO00468 2067 aa13.71□□□□□ -0.21
CDHR4-201ENST00000343366 CA1P00915 261 aaPredicted RBP13.71□□□□□ -0.21
CDHR4-201ENST00000343366 ZNF680Q8NEM1 530 aa13.71□□□□□ -0.21
CDHR4-201ENST00000343366 TM2D3Q9BRN9 247 aa13.71□□□□□ -0.21
CDHR4-201ENST00000343366 EPDR1Q9UM22 224 aa13.71□□□□□ -0.21
CDHR4-201ENST00000343366 NMBP08949 121 aa13.7□□□□□ -0.22
CDHR4-201ENST00000343366 LYPD6BQ8NI32 183 aa13.7□□□□□ -0.22
CDHR4-201ENST00000343366 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
CDHR4-201ENST00000343366 GGTLC3B5MD39 225 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 PRAC2D3DTV9 90 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 IGKV3-20P01619 116 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 LEPP41159 167 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 CDKN1BP46527 198 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 DEFB1P60022 68 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 UBE2G2P60604 165 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 CST9LP1Q5W188 147 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 AMTNQ6UX39 209 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 YTHDF2Q9Y5A9 579 aaKnown RBP13.69□□□□□ -0.22
CDHR4-201ENST00000343366 FRAS1Q86XX4 4008 aa13.69□□□□□ -0.22
CDHR4-201ENST00000343366 PAGE4O60829 102 aa13.68□□□□□ -0.22
CDHR4-201ENST00000343366 TCRAP04437 139 aa13.68□□□□□ -0.22
CDHR4-201ENST00000343366 ZNF705DP0CH99 300 aaPredicted RBP13.68□□□□□ -0.22
CDHR4-201ENST00000343366 ZNF705BP0CI00 300 aaPredicted RBP13.68□□□□□ -0.22
CDHR4-201ENST00000343366 CYB561D1Q8N8Q1 229 aa13.68□□□□□ -0.22
CDHR4-201ENST00000343366 C20orf144Q9BQM9 153 aa13.68□□□□□ -0.22
CDHR4-201ENST00000343366 ZNF492Q9P255 531 aa13.68□□□□□ -0.22
CDHR4-201ENST00000343366 HERC2O95714 4834 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 A0A1B0GV50 99 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 ZNF138P52744 262 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 RNF183Q96D59 192 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 AGPAT4-IT1Q9H0P7 198 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
CDHR4-201ENST00000343366 ALMS1Q8TCU4 4167 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 IGKV2-40A0A087WW87 121 aaPredicted RBP13.66□□□□□ -0.22
CDHR4-201ENST00000343366 SPRY2O43597 315 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 IGKV2D-40P01614 121 aaPredicted RBP13.66□□□□□ -0.22
CDHR4-201ENST00000343366 S100A9P06702 114 aaKnown RBP13.66□□□□□ -0.22
CDHR4-201ENST00000343366 GOLT1AQ6ZVE7 132 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 TMEM75Q8N9X5 138 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 NDFIP1Q9BT67 221 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 RPH3ALQ9UNE2 315 aa13.66□□□□□ -0.22
CDHR4-201ENST00000343366 C11orf94C9JXX5 98 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 INSP01308 110 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 CT45A10P0DMU9 189 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 CRISP2P16562 243 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 ZNF767PQ75MW2 155 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 TMEM256Q8N2U0 113 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 VGLL1Q99990 258 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 SLC35B3Q9H1N7 401 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 EDA2RQ9HAV5 297 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
CDHR4-201ENST00000343366 PEX7O00628 323 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 PDE6DO43924 150 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 NDUFS6O75380 124 aaKnown RBP13.64□□□□□ -0.23
CDHR4-201ENST00000343366 GIG44P09565 113 aaPredicted RBP13.64□□□□□ -0.23
CDHR4-201ENST00000343366 BCL2P10415 239 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 RAB14P61106 215 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 CCL20P78556 96 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 ERCC8Q13216 396 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 SPINK13Q1W4C9 94 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 FAM19A4Q96LR4 140 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 VAX2Q9UIW0 290 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 GOLT1BQ9Y3E0 138 aa13.64□□□□□ -0.23
CDHR4-201ENST00000343366 GNG5P63218 68 aa13.63□□□□□ -0.23
CDHR4-201ENST00000343366 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
CDHR4-201ENST00000343366 SAPCD1Q5SSQ6 148 aa13.63□□□□□ -0.23
CDHR4-201ENST00000343366 CSNK1G2-AS1Q8NCQ2 148 aa13.63□□□□□ -0.23
CDHR4-201ENST00000343366 FMC1Q96HJ9 113 aa13.63□□□□□ -0.23
CDHR4-201ENST00000343366 SMIM9A6NGZ8 99 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 M0R2Z0 102 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 ATP5G3P48201 142 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 UBE2G1P62253 170 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 FLI1Q01543 452 aaPredicted RBP13.62□□□□□ -0.23
CDHR4-201ENST00000343366 ZFAND6Q6FIF0 208 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 NEU1Q99519 415 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
CDHR4-201ENST00000343366 KLLNB2CW77 178 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 GPX1P07203 203 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 AKR1C3P42330 323 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 FXYD7P58549 80 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 RARRES2Q99969 163 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 PSG8Q9UQ74 426 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 ZFP30Q9Y2G7 519 aa13.61□□□□□ -0.23
CDHR4-201ENST00000343366 KLF12Q9Y4X4 402 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms