RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MRPL51Q4U2R6 128 aaKnown RBP9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 FAM159AQ6UWV7 190 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 VMO1Q7Z5L0 202 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 MRPL52Q86TS9 123 aaKnown RBP9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 VGLL1Q99990 258 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 PLA2G2CQ5R387 149 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 OR4X2Q8NGF9 303 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 MSRB1Q9NZV6 116 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 G3V318 75 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 BRD3OSQ6XYD6 125 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 ZNF479Q96JC4 524 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 NXT2Q9NPJ8 142 aaKnown RBP9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 HIVEP2P31629 2446 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 IGHV3OR16-12A0A075B7B8 117 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 EIF4EBP1Q13541 118 aaPredicted RBP9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 TEX36Q5VZQ5 186 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 Q8N7P7 452 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 TNFRSF14Q92956 283 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 NCKAP5O14513 1909 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 GRNP28799 593 aaKnown RBP9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 UCNP55089 124 aa9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 C14orf178Q8N769 122 aaPredicted RBP9.86□□□□□ -0.83
SNRNP48-201ENST00000342415 KLRB1Q12918 225 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 K7ERJ3 54 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 SMAD7O15105 426 aaKnown RBP9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 ZNF492Q9P255 531 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 TNFRSF6BO95407 300 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 LTAP01374 205 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 ASIPP42127 132 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 ANKRD39Q53RE8 183 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 CLEC2AQ6UVW9 174 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 ZNF491Q8N8L2 437 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 KIR2DL4Q99706 377 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 TMEM238LA0A1B0GVL6 79 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 A6NJY4 79 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 LINC00310P59036 64 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 ZNF747Q9BV97 191 aa9.85□□□□□ -0.83
SNRNP48-201ENST00000342415 DSCAMO60469 2012 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 IL17RELQ6ZVW7 336 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 THAP8Q8NA92 274 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 GFRA4Q9GZZ7 299 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 NDUFS7O75251 213 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 PPBPP02775 128 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 RAB9AP51151 201 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 OR9G4Q8NGQ1 327 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 DPF1Q92782 380 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 PRR25Q96S07 402 aa9.84□□□□□ -0.83
SNRNP48-201ENST00000342415 TMEM8BA6NDV4 472 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 HAX1O00165 279 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 COX8AP10176 69 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 GP9P14770 177 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 FAM106AQ4KMX7 169 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 SAP30O75446 220 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 SRSF1Q07955 248 aaKnown RBP eCLIP9.83□□□□□ -0.841e-8■■■□□ 14.7
SNRNP48-201ENST00000342415 CT83Q5H943 113 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 JMJD1CQ15652 2540 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 ZNF815PA8K554 130 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 CD7P09564 240 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 EFNA4P52798 201 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 SAMD13Q5VXD3 122 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 AMTNQ6UX39 209 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 C1orf159Q96HA4 380 aa9.83□□□□□ -0.84
SNRNP48-201ENST00000342415 C2orf70A6NJV1 201 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 CGB3P0DN86 165 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 CGB7P0DN87 165 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 EGR2P11161 476 aaPredicted RBP9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 IGKV1D-37A0A075B6S9 117 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 ABCA12Q86UK0 2595 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 MGAQ8IWI9 3026 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 THBDP07204 575 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 LOXL1Q08397 574 aaPredicted RBP9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 ESDP10768 282 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 LAGE3Q14657 143 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 NEGR1Q7Z3B1 354 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 WIPF2Q8TF74 440 aaPredicted RBP9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 NCOR1P1Q9H4R4 102 aa9.82□□□□□ -0.84
SNRNP48-201ENST00000342415 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 CHTOPQ9Y3Y2 248 aaKnown RBP9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 ID1P41134 155 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 ZNF562Q6V9R5 426 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 POLQO75417 2590 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 K7EP13 123 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 PAX8Q06710 450 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 LYPD1Q8N2G4 141 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 LRRK2Q5S007 2527 aa9.81□□□□□ -0.84
SNRNP48-201ENST00000342415 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 PSMB11A5LHX3 300 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 CEACAM4O75871 244 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 SIGLEC15Q6ZMC9 328 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms