RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 OR4X2Q8NGF9 303 aa9.49□□□□□ -0.89
CDH5-201ENST00000341529 LINC00477Q96M19 166 aa9.49□□□□□ -0.89
CDH5-201ENST00000341529 PRRC2AP48634 2157 aaKnown RBP9.48□□□□□ -0.89
CDH5-201ENST00000341529 FNDC10F2Z333 226 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 PRSS57Q6UWY2 283 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 BEND2Q8NDZ0 799 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 C11orf52Q96A22 123 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 ALKBH7Q9BT30 221 aaPredicted RBP9.48□□□□□ -0.89
CDH5-201ENST00000341529 MOB4Q9Y3A3 225 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 Q0VG73 95 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 ZNF491Q8N8L2 437 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 PEF1Q9UBV8 284 aaKnown RBP9.48□□□□□ -0.89
CDH5-201ENST00000341529 NCKAP5O14513 1909 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 IGLL1P15814 213 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
CDH5-201ENST00000341529 ZNF418Q8TF45 676 aaPredicted RBP9.48□□□□□ -0.89
CDH5-201ENST00000341529 KLF2Q9Y5W3 355 aaPredicted RBP9.48□□□□□ -0.89
CDH5-201ENST00000341529 DLEU1O43261 78 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 TTC9CQ8N5M4 171 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 TMEM158Q8WZ71 300 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 SPCS1Q9Y6A9 102 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 M0R1W7 72 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 CIDEAO60543 219 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 TDGF1P3P51864 188 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 F6UB75 175 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 DEFB1P60022 68 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 COTL1Q14019 142 aa9.47□□□□□ -0.89
CDH5-201ENST00000341529 TRAV21A0A0B4J279 112 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 ATP5LO75964 103 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 NPSP0C0P6 89 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 SMIM13P0DJ93 91 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.89
CDH5-201ENST00000341529 RIPPLY3P57055 190 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 ZC2HC1BQ5TFG8 222 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 CHCHD1Q96BP2 118 aaKnown RBP9.46□□□□□ -0.89
CDH5-201ENST00000341529 MEGF9Q9H1U4 602 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 MINOS1Q5TGZ0 78 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 Q8NA96 180 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 C2orf88Q9BSF0 95 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 MINOS1-NBL1R4GNA1 71 aa9.46□□□□□ -0.89
CDH5-201ENST00000341529 LINC00311Q8N616 119 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 LINC01587Q99440 93 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 RNF5Q99942 180 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 PYGO2Q9BRQ0 406 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 RAX2Q96IS3 184 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
CDH5-201ENST00000341529 MRPL16Q9NX20 251 aaKnown RBP9.46□□□□□ -0.9
CDH5-201ENST00000341529 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
CDH5-201ENST00000341529 SYNJ2BPP57105 145 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 TMEM95Q3KNT9 176 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 A0A1B0GW15 77 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 IGLC2P0DOY2 106 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 MRPL27Q9P0M9 148 aaKnown RBP9.45□□□□□ -0.9
CDH5-201ENST00000341529 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
CDH5-201ENST00000341529 PRR25Q96S07 402 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 MSRB1Q9NZV6 116 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 REV3LO60673 3130 aa9.45□□□□□ -0.9
CDH5-201ENST00000341529 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 P0C879 139 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 NPIPB6E9PJ23 425 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 C3orf36Q3SXR2 165 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 GEMIN7Q9H840 131 aaKnown RBP9.44□□□□□ -0.9
CDH5-201ENST00000341529 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
CDH5-201ENST00000341529 KAAG1Q9UBP8 84 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 DPM2O94777 84 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 MTURNQ8N3F0 131 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 ZNF503Q96F45 646 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 TNFRSF18Q9Y5U5 241 aa9.44□□□□□ -0.9
CDH5-201ENST00000341529 CYSLTR1Q9Y271 337 aa9.43□□□□□ -0.9
CDH5-201ENST00000341529 TRAV12-2A0A075B6T6 113 aa9.43□□□□□ -0.9
CDH5-201ENST00000341529 SUMO2P61956 95 aaKnown RBP9.43□□□□□ -0.9
CDH5-201ENST00000341529 BCL6BQ8N143 479 aaPredicted RBP9.43□□□□□ -0.9
CDH5-201ENST00000341529 K7EIM0 57 aa9.43□□□□□ -0.9
CDH5-201ENST00000341529 NPYP01303 97 aa9.43□□□□□ -0.9
CDH5-201ENST00000341529 TNFRSF6BO95407 300 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 IGKCP01834 107 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 RPL13AP40429 203 aaKnown RBP9.42□□□□□ -0.9
CDH5-201ENST00000341529 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
CDH5-201ENST00000341529 THAP8Q8NA92 274 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 SPTBN5Q9NRC6 3674 aaKnown RBP9.42□□□□□ -0.9
CDH5-201ENST00000341529 A0A1B0GWB2 263 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 IGHV3-53P01767 116 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 UBE2E1P51965 193 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 NPC2P61916 151 aa9.42□□□□□ -0.9
CDH5-201ENST00000341529 SRSF1Q07955 248 aaKnown RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms