RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 GBGT1Q8N5D6 347 aa5.41□□□□□ -1.54
NUP43-201ENST00000340413 TSKUQ8WUA8 353 aa5.41□□□□□ -1.54
NUP43-201ENST00000340413 RPP21Q9H633 154 aaKnown RBP5.41□□□□□ -1.54
NUP43-201ENST00000340413 COLCA2A8K830 154 aa5.4□□□□□ -1.54
NUP43-201ENST00000340413 A8MWL6 223 aa5.4□□□□□ -1.54
NUP43-201ENST00000340413 FAM3BP58499 235 aaPredicted RBP5.4□□□□□ -1.54
NUP43-201ENST00000340413 TM4SF20Q53R12 229 aa5.4□□□□□ -1.54
NUP43-201ENST00000340413 IBA57Q5T440 356 aaKnown RBP5.4□□□□□ -1.54
NUP43-201ENST00000340413 LCNL1Q6ZST4 164 aa5.4□□□□□ -1.54
NUP43-201ENST00000340413 GOLT1AQ6ZVE7 132 aa5.4□□□□□ -1.54
NUP43-201ENST00000340413 MS4A6AQ9H2W1 248 aa5.4□□□□□ -1.54
NUP43-201ENST00000340413 GATCO43716 136 aaKnown RBP5.4□□□□□ -1.55
NUP43-201ENST00000340413 SYNJ2BPP57105 145 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 PIK3CD-AS1Q5SR53 167 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 FAM162BQ5T6X4 162 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 C10orf99Q6UWK7 81 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 EXOC3-AS1Q8N2X6 119 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 SMR3AQ99954 134 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 CITED2Q99967 270 aaPredicted RBP5.4□□□□□ -1.55
NUP43-201ENST00000340413 SRD5A3Q9H8P0 318 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 A0A1W2PPQ1 181 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 IGLV1-51P01701 117 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 ELOBQ15370 118 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 ATRAIDQ6UW56 229 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 LINC00482Q8N8I6 264 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 OR8A1Q8NGG7 326 aa5.4□□□□□ -1.55
NUP43-201ENST00000340413 IZUMO1RA6ND01 250 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 C9orf66Q5T8R8 295 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 WFDC9Q8NEX5 89 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 DERL1Q9BUN8 251 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 CNFNQ9BYD5 112 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 NAT8BQ9UHF3 227 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 BEAN1Q3B7T3 259 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 ADAMTSL5Q6ZMM2 481 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 DYNLRB2Q8TF09 96 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 DLX4Q92988 240 aaPredicted RBP5.39□□□□□ -1.55
NUP43-201ENST00000340413 DAZAP1Q96EP5 407 aaKnown RBP5.39□□□□□ -1.55
NUP43-201ENST00000340413 A0A0J9YX75 114 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 FABP5P3A8MUU1 101 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 KLLNB2CW77 178 aa5.39□□□□□ -1.55
NUP43-201ENST00000340413 IGHV4-4A0A075B6R2 117 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 P01737 135 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 SLURP1P55000 103 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 ERVFC1-1P60608 527 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 GNG5P63218 68 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 SHISA2Q6UWI4 295 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 ZNF738Q8NE65 137 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 GNB1LQ9BYB4 327 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 F2Z2F3 143 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 HLA-DRB4P13762 266 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 EBLN2Q6P2I7 272 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 RBPMS2Q6ZRY4 209 aaKnown RBP5.38□□□□□ -1.55
NUP43-201ENST00000340413 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 NUDT11Q96G61 164 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 HLA-DRB4X5D2U9 266 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 PLXNB1O43157 2135 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 TRAV21A0A0B4J279 112 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 RAB5AP20339 215 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 CTRLP40313 264 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 CACNG7P62955 275 aa5.38□□□□□ -1.55
NUP43-201ENST00000340413 MORN3Q6PF18 240 aaPredicted RBP5.38□□□□□ -1.55
NUP43-201ENST00000340413 WNK1Q9H4A3 2382 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 BTN1A1Q13410 526 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 TDRG1Q3Y452 100 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 KCNS1Q96KK3 526 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 AGPAT4-IT1Q9H0P7 198 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 PRNTQ86SH4 94 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 C20orf173Q96LM9 149 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 SVEP1Q4LDE5 3571 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 PGPEP1LA6NFU8 196 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.37□□□□□ -1.55
NUP43-201ENST00000340413 ZC2HC1AQ96GY0 325 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 DUX5Q96PT3 197 aa5.37□□□□□ -1.55
NUP43-201ENST00000340413 ZNF256Q9Y2P7 627 aaPredicted RBP5.37□□□□□ -1.55
NUP43-201ENST00000340413 SNAI2O43623 268 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 EIF3GO75821 320 aaKnown RBP eCLIP5.36□□□□□ -1.55
NUP43-201ENST00000340413 HLA-DQA1P01909 254 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 TMEM256Q8N2U0 113 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 FAM210BQ96KR6 192 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 SSBP4Q9BWG4 385 aaPredicted RBP5.36□□□□□ -1.55
NUP43-201ENST00000340413 A0A1B0GXF2 115 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 ZNF705GA8MUZ8 300 aaPredicted RBP5.36□□□□□ -1.55
NUP43-201ENST00000340413 KRTAP10-3P60369 221 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 OR5I1Q13606 314 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 ZNF493Q6ZR52 646 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 M0R3E3 92 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 ZNF207O43670 478 aaKnown RBP5.36□□□□□ -1.55
NUP43-201ENST00000340413 NXPH4O95158 308 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 OR5AL1P0C617 328 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 IGLC6P0CF74 106 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 RIGQ13278 110 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 ZFAND2AQ8N6M9 145 aa5.36□□□□□ -1.55
NUP43-201ENST00000340413 ZANQ9Y493 2812 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 TMEM189A5PLL7 270 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 SH2D1AO60880 128 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 MGST1P10620 155 aaKnown RBP5.35□□□□□ -1.55
NUP43-201ENST00000340413 RAB5BP61020 215 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 BORCS7Q96B45 105 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms