RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 WIPF2Q8TF74 440 aaPredicted RBP17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 SMIM12Q96EX1 92 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 KCNS1Q96KK3 526 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 MIEN1Q9BRT3 115 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 ITPR3Q14573 2671 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 C20orf202A1L168 122 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 Q6ZQT7 251 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 NRN1Q9NPD7 142 aa17.81■□□□□ 0.44
CLPTM1-201ENST00000337392 RNASEKQ6P5S7 137 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 K7EQM0 130 aa17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 COL5A1-AS1Q5SY13 56 aa17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 C10orf99Q6UWK7 81 aa17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 LYPD1Q8N2G4 141 aa17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 URB1-AS1Q96HZ7 61 aa17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 SORL1Q92673 2214 aa17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 PRRC2AP48634 2157 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-201ENST00000337392 ITPR2Q14571 2701 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 IGKV3-7A0A075B6H7 116 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 ESDP10768 282 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 ATP5G2Q06055 141 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 OR10J3Q5JRS4 329 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 EEF1AKMT3Q96AZ1 226 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 ACANP16112 2415 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 K7EP13 123 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 CSN1S1P47710 185 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 PDE6HQ13956 83 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 LCN12Q6JVE5 192 aa17.79■□□□□ 0.44
CLPTM1-201ENST00000337392 S100A7P31151 101 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 NIT1Q86X76 327 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 TXN2Q99757 166 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 RNF24Q9Y225 148 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 NDUFS8O00217 210 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 SH2D1AO60880 128 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 ZNF324O75467 553 aaPredicted RBP17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 EDN2P20800 178 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 ATOH7Q8N100 152 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 PAM16Q9Y3D7 125 aa17.78■□□□□ 0.44
CLPTM1-201ENST00000337392 GOSR1O95249 250 aa17.77■□□□□ 0.44
CLPTM1-201ENST00000337392 C20orf144Q9BQM9 153 aa17.77■□□□□ 0.44
CLPTM1-201ENST00000337392 MEGF9Q9H1U4 602 aa17.77■□□□□ 0.44
CLPTM1-201ENST00000337392 NIPBLQ6KC79 2804 aaeCLIP17.77■□□□□ 0.44
CLPTM1-201ENST00000337392 FLNAP21333 2647 aaKnown RBP17.77■□□□□ 0.44
CLPTM1-201ENST00000337392 CSN3P07498 182 aa17.77■□□□□ 0.43
CLPTM1-201ENST00000337392 PAFAH1B2P68402 229 aa17.77■□□□□ 0.43
CLPTM1-201ENST00000337392 PRR25Q96S07 402 aa17.77■□□□□ 0.43
CLPTM1-201ENST00000337392 HELZ2Q9BYK8 2649 aaKnown RBP17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 TMEM213A2RRL7 107 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 C19orf54Q5BKX5 351 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 TIMM8BQ9Y5J9 83 aaPredicted RBP17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 IGHV4-59P01825 116 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 PF4V1P10720 104 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 PSG9Q00887 426 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 CT83Q5H943 113 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 C16orf54Q6UWD8 224 aa17.76■□□□□ 0.43
CLPTM1-201ENST00000337392 CT45A10P0DMU9 189 aa17.75■□□□□ 0.43
CLPTM1-201ENST00000337392 RNF223E7ERA6 249 aa17.75■□□□□ 0.43
CLPTM1-201ENST00000337392 SMAD7O15105 426 aaKnown RBP17.75■□□□□ 0.43
CLPTM1-201ENST00000337392 PPIFP30405 207 aaKnown RBP17.75■□□□□ 0.43
CLPTM1-201ENST00000337392 COX19Q49B96 90 aa17.75■□□□□ 0.43
CLPTM1-201ENST00000337392 CLEC5AQ9NY25 188 aa17.75■□□□□ 0.43
CLPTM1-201ENST00000337392 TMEM238LA0A1B0GVL6 79 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 IL17RELQ6ZVW7 336 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 ATP5L2Q7Z4Y8 100 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 Q8N976 141 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 CBY3A6NI87 242 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 B4DSR2 109 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 TGFAP01135 160 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 ARL3P36405 182 aa17.74■□□□□ 0.43
CLPTM1-201ENST00000337392 A6NDX4 124 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 J3KRW8 73 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 DEFB112Q30KQ8 113 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 HIST2H2BCQ6DN03 193 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 RASL11AQ6T310 242 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 LYZL1Q6UWQ5 148 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 SCGB2A1O75556 95 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 C3orf79P0CE67 100 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 LINC00173Q6ZV60 143 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 ZNF575Q86XF7 245 aa17.73■□□□□ 0.43
CLPTM1-201ENST00000337392 TRAV8-2A0A0B4J237 113 aa17.72■□□□□ 0.43
CLPTM1-201ENST00000337392 HSBP1O75506 76 aa17.72■□□□□ 0.43
CLPTM1-201ENST00000337392 STPG4Q8N801 248 aa17.72■□□□□ 0.43
CLPTM1-201ENST00000337392 TRBV7-1A0A0A6YYK4 115 aa17.72■□□□□ 0.43
CLPTM1-201ENST00000337392 S100A7AQ86SG5 101 aa17.72■□□□□ 0.43
CLPTM1-201ENST00000337392 GFRA4Q9GZZ7 299 aa17.72■□□□□ 0.43
CLPTM1-201ENST00000337392 A0A1B0GUT8 65 aa17.71■□□□□ 0.43
CLPTM1-201ENST00000337392 COX6B1P14854 86 aa17.71■□□□□ 0.43
CLPTM1-201ENST00000337392 METTL26Q96S19 204 aa17.71■□□□□ 0.43
CLPTM1-201ENST00000337392 SRD5A1P18405 259 aa17.71■□□□□ 0.43
CLPTM1-201ENST00000337392 C8orf86Q6ZUL3 223 aa17.71■□□□□ 0.43
CLPTM1-201ENST00000337392 MCRIP2Q9BUT9 160 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-201ENST00000337392 MTORP42345 2549 aa17.71■□□□□ 0.42
CLPTM1-201ENST00000337392 TMEM189A5PLL7 270 aa17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 Q6ZVH6 145 aa17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 DUX5Q96PT3 197 aa17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 MSRB1Q9NZV6 116 aa17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 LOC102724200A0A096LPH7 203 aaPredicted RBP17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 TRBV6-1A0A0K0K1D8 114 aa17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 SERTM2A0A1B0GWG4 89 aa17.7■□□□□ 0.42
CLPTM1-201ENST00000337392 M0R2Z0 102 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms