RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 C17orf100A8MU93 164 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 VKORC1Q9BQB6 163 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 CXCL13O43927 109 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 TNFRSF4P43489 277 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 MRPS36P82909 103 aaKnown RBP6.7□□□□□ -1.34
TDP1-201ENST00000335725 CLLU1OSQ5K130 101 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 FAM27BQ5VT28 67 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 COL5A1P20908 1838 aaPredicted RBP6.7□□□□□ -1.34
TDP1-201ENST00000335725 LRRK1Q38SD2 2015 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 H7C423 109 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 BRWD1-AS2P59051 145 aa6.7□□□□□ -1.34
TDP1-201ENST00000335725 TET1Q8NFU7 2136 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 UPK2O00526 184 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 LAMTOR3Q9UHA4 124 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 A0A0J9YY99 117 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 OVOL3O00110 214 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 CDSNQ15517 529 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 FLVCR1-AS1Q8TAF5 88 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
TDP1-201ENST00000335725 DKK1O94907 266 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 RSPO4Q2I0M5 234 aaPredicted RBP6.68□□□□□ -1.34
TDP1-201ENST00000335725 FAM201AQ5SY85 155 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 RNF182Q8N6D2 247 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 FCGR3BO75015 233 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 CCL11P51671 97 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 LAGE3Q14657 143 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 PRNTQ86SH4 94 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 SLC25A45Q8N413 288 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 TRGV5A0A0B4J1U4 118 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 C15orf61A6NNL5 157 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 PAPPA-AS1Q5QFB9 102 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 LYZL1Q6UWQ5 148 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 FAM110DQ8TAY7 271 aaPredicted RBP6.68□□□□□ -1.34
TDP1-201ENST00000335725 HS3ST6Q96QI5 342 aa6.68□□□□□ -1.34
TDP1-201ENST00000335725 H7C2G1 150 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 PRSS12P56730 875 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 TMEM263Q8WUH6 116 aaKnown RBP6.67□□□□□ -1.34
TDP1-201ENST00000335725 PLAUP00749 431 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 UBALD1Q8TB05 177 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 TRBV7-1A0A0A6YYK4 115 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 GFERP55789 205 aa6.67□□□□□ -1.34
TDP1-201ENST00000335725 ZNF837Q96EG3 531 aaPredicted RBP6.67□□□□□ -1.34
TDP1-201ENST00000335725 ARHGEF17Q96PE2 2063 aaPredicted RBP6.66□□□□□ -1.34
TDP1-201ENST00000335725 LINC00473A8K010 186 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 COX6B1P14854 86 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 MORN5Q5VZ52 161 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 Q9H3A6 140 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 CACNA1DQ01668 2161 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 IGKV1OR2-108A0A075B7D4 117 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 TMEM30CPA0ZSE6 113 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 SUB1P53999 127 aaKnown RBP eCLIP6.66□□□□□ -1.34
TDP1-201ENST00000335725 STHQ8IWL8 128 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 COL4A5P29400 1685 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 GUSBP11Q6P575 273 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 FOXB1Q99853 325 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
TDP1-201ENST00000335725 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.65□□□□□ -1.34
TDP1-201ENST00000335725 CD69Q07108 199 aa6.65□□□□□ -1.34
TDP1-201ENST00000335725 C2orf83Q53S99 150 aa6.65□□□□□ -1.34
TDP1-201ENST00000335725 LINC00305Q7Z4B0 112 aa6.65□□□□□ -1.34
TDP1-201ENST00000335725 Q8IYB0 196 aa6.65□□□□□ -1.34
TDP1-201ENST00000335725 S1PR3Q99500 378 aa6.65□□□□□ -1.34
TDP1-201ENST00000335725 BEX4Q9NWD9 120 aaPredicted RBP6.65□□□□□ -1.34
TDP1-201ENST00000335725 NSUN5P1Q3KNT7 163 aa6.65□□□□□ -1.34
TDP1-201ENST00000335725 NGFP01138 241 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 IGHV3-13P01766 116 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 IGKV3-11P04433 115 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 WT1P19544 449 aaPredicted RBP6.65□□□□□ -1.35
TDP1-201ENST00000335725 DEFB132Q7Z7B7 95 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 SMCR5Q8TEV8 140 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 ADAMTS20P59510 1910 aa6.65□□□□□ -1.35
TDP1-201ENST00000335725 IGHG2P01859 326 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 ZNF134P52741 427 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 RHOHQ15669 191 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
TDP1-201ENST00000335725 NUP37Q8NFH4 326 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 CD177Q8N6Q3 437 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 DAND5Q8N907 189 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 TMEM75Q8N9X5 138 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 IQCF6A8MYZ5 107 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 C3orf36Q3SXR2 165 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 PRR25Q96S07 402 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 TMEM14BQ9NUH8 114 aa6.64□□□□□ -1.35
TDP1-201ENST00000335725 Q96MF0 132 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 Q9Y3F1 56 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 TRAV26-2A0A0B4J265 109 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 TRIAP1O43715 76 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 SCRG1O75711 98 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 ZNF32P17041 273 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms