RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 ERCC8Q13216 396 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 FAM120AOSQ5T036 256 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 MALP21145 153 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 GATD1Q8NB37 220 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 FRMPD3Q5JV73 1810 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 Q0VFX4 171 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 MLANAQ16655 118 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 ITLN2Q8WWU7 325 aaPredicted RBP5.31□□□□□ -1.56
CPEB4-202ENST00000334035 TRAV26-1A0A087WT03 109 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 E9PLD3 99 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 LINC01619G3V211 115 aa5.31□□□□□ -1.56
CPEB4-202ENST00000334035 ZNF106Q9H2Y7 1883 aaKnown RBP5.31□□□□□ -1.56
CPEB4-202ENST00000334035 IGLV1-44P01699 117 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 RBMY1FQ15415 496 aaKnown RBP5.3□□□□□ -1.56
CPEB4-202ENST00000334035 ZNF524Q96C55 264 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 NDUFA12Q9UI09 145 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 POLR2AP24928 1970 aaKnown RBP5.3□□□□□ -1.56
CPEB4-202ENST00000334035 NDUFC2O95298 119 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 HERV-K104P63124 156 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 AMTNQ6UX39 209 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 LINC01560Q8TB33 94 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 PROK2Q9HC23 129 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 IGHV3OR16-10A0A075B7F0 116 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 THBDP07204 575 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 HERVK_113P63121 156 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 FAM167A-AS1Q96KT0 104 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 SPANXB1Q9NS25 103 aaPredicted RBP5.3□□□□□ -1.56
CPEB4-202ENST00000334035 VWA8A3KMH1 1905 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 SRRM4A7MD48 611 aaKnown RBP5.3□□□□□ -1.56
CPEB4-202ENST00000334035 PRB4P10163 310 aaPredicted RBP5.3□□□□□ -1.56
CPEB4-202ENST00000334035 FXYD2P54710 66 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 LINC01620Q4KN68 170 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 VMO1Q7Z5L0 202 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 CCL19Q99731 98 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 PRIMA1Q86XR5 153 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 PRSS29PA6NIE9 313 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 PRSS22Q9GZN4 317 aa5.3□□□□□ -1.56
CPEB4-202ENST00000334035 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 C11orf86A6NJI1 115 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 H3BUA1 57 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 IGHV3-11P01762 117 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 SH2D6Q7Z4S9 175 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 ODF3L1Q8IXM7 274 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 SPXQ9BT56 116 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 KAAG1Q9UBP8 84 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 DOCK6Q96HP0 2047 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 Q6ZUT4 128 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 TRGV2A0A075B6R0 118 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 IGLV3-9A0A075B6K5 115 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 WFDC2Q14508 124 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 KIF26BQ2KJY2 2108 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 NDUFA4O00483 81 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 ZNF491Q8N8L2 437 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 MBD6Q96DN6 1003 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 TIMM17AQ99595 171 aa5.29□□□□□ -1.56
CPEB4-202ENST00000334035 DAZ1Q9NQZ3 744 aaKnown RBP5.29□□□□□ -1.56
CPEB4-202ENST00000334035 PAX4O43316 350 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 IGLV2-14P01704 120 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 GTSF1Q8WW33 167 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 H0YGX0 51 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 ODF1Q14990 250 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 INSP01308 110 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 ZNF134P52741 427 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 Q6ZR03 302 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 STHQ8IWL8 128 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 ICOSQ9Y6W8 199 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 PRB3Q04118 309 aaPredicted RBP5.28□□□□□ -1.56
CPEB4-202ENST00000334035 C5orf47Q569G3 176 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 IGFL4Q6B9Z1 124 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 DUX4L9Q6RFH8 374 aaPredicted RBP5.28□□□□□ -1.56
CPEB4-202ENST00000334035 IGHV1-69P01742 117 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 CR1LQ2VPA4 569 aa5.28□□□□□ -1.56
CPEB4-202ENST00000334035 COL4A3Q01955 1670 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 DKK1O94907 266 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 CITED2Q99967 270 aaPredicted RBP5.27□□□□□ -1.57
CPEB4-202ENST00000334035 LAMTOR3Q9UHA4 124 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
CPEB4-202ENST00000334035 NDUFV3P56181 108 aaKnown RBP5.27□□□□□ -1.57
CPEB4-202ENST00000334035 PRRC2BQ5JSZ5 2229 aaKnown RBP5.27□□□□□ -1.57
CPEB4-202ENST00000334035 IGLV2-8P01709 118 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 LINC00643Q86TS7 51 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 TP53TG3Q9ULZ0 132 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 U3KQK5 164 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 ARID1AO14497 2285 aa5.27□□□□□ -1.57
CPEB4-202ENST00000334035 IGHV1OR15-1A0A075B7D0 117 aa5.26□□□□□ -1.57
CPEB4-202ENST00000334035 ZNF672Q499Z4 452 aaPredicted RBP5.26□□□□□ -1.57
CPEB4-202ENST00000334035 PATE2Q6UY27 113 aa5.26□□□□□ -1.57
CPEB4-202ENST00000334035 IMUPQ9GZP8 106 aa5.26□□□□□ -1.57
CPEB4-202ENST00000334035 JPT2Q9H910 190 aa5.26□□□□□ -1.57
CPEB4-202ENST00000334035 WISP1O95388 367 aa5.26□□□□□ -1.57
CPEB4-202ENST00000334035 ATP5J2P56134 94 aa5.26□□□□□ -1.57
CPEB4-202ENST00000334035 DSCR9P59020 149 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms