RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 SH2D6Q7Z4S9 175 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 GTSCR1Q86UQ5 136 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 ZNF479Q96JC4 524 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 MAP1LC3AQ9H492 121 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 LINC01546A6NGU7 62 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 MRPS12O15235 138 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 LEPP41159 167 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 CCL8P80075 99 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 BSPH1Q075Z2 132 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 SIGLEC9Q9Y336 463 aa14.18□□□□□ -0.14
CLSTN3-202ENST00000331148 ETDBQ3ZM63 59 aa14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 H3BMG7 143 aa14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 FCER1GP30273 86 aa14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 RAB9AP51151 201 aa14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 SRSF1Q07955 248 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 Q5PR19 223 aa14.17□□□□□ -0.14
CLSTN3-202ENST00000331148 ATRXP46100 2492 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 PRSS1P07477 247 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 HLA-DRB4P13762 266 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 HLA-DRB4X5D2U9 266 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 NPIPB5A8MRT5 1133 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 FBXL19-AS1Q494R0 122 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 ZC2HC1BQ5TFG8 222 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 FOXC2Q99958 501 aa14.16□□□□□ -0.14
CLSTN3-202ENST00000331148 FAM90A27PA6NNH2 459 aa14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 DPM2O94777 84 aa14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 CKS1BP61024 79 aa14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 KLF17Q5JT82 389 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 RNF185Q96GF1 192 aa14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 EGR2P11161 476 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 TCTEX1D4Q5JR98 221 aa14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 RNASE6Q93091 150 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-202ENST00000331148 GAS8-AS1O95177 125 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 DLX6P56179 175 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 ADORA2A-AS1P86434 159 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 C12orf74Q32Q52 190 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 ZNF502Q8TBZ5 544 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 RNF125Q96EQ8 232 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 AAMDCQ9H7C9 122 aa14.14□□□□□ -0.15
CLSTN3-202ENST00000331148 IGLC6P0CF74 106 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 AMTNQ6UX39 209 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 PPP1R27Q86WC6 154 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 ZNF491Q8N8L2 437 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 PRO0461Q9UI25 63 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 TMEM238LA0A1B0GVL6 79 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 NDUFB3O43676 98 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 IL4P05112 153 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 PLGLAQ15195 96 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 ADIPOQQ15848 244 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 GAGE13Q4V321 117 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 LYPD2Q6UXB3 125 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 COX8CQ7Z4L0 72 aa14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 NXT2Q9NPJ8 142 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-202ENST00000331148 IGKV2-40A0A087WW87 121 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 ATP5LO75964 103 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 IGKV2D-40P01614 121 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 PDE6HQ13956 83 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 TAL2Q16559 108 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 LINC01559Q495D7 138 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 MAPKAPK5-AS1Q8N8E1 139 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 MSRB1Q9NZV6 116 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 K7EIM0 57 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 LOXP28300 417 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 INSL3P51460 131 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 SCGB2A2Q13296 93 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 MTURNQ8N3F0 131 aa14.12□□□□□ -0.15
CLSTN3-202ENST00000331148 TNFRSF6BO95407 300 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 IGHV1-8P0DP01 117 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 TMEM158Q8WZ71 300 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 PRR25Q96S07 402 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 PLCE1Q9P212 2302 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 ATP5G2Q06055 141 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 RRN3P1Q2M238 152 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 TMEM155Q4W5P6 130 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 LINC01560Q8TB33 94 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 FBXL15Q9H469 300 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 CTSZQ9UBR2 303 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 ICE1Q9Y2F5 2266 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 ITPR1Q14643 2758 aa14.11□□□□□ -0.15
CLSTN3-202ENST00000331148 ZNF80P51504 273 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 WFDC12Q8WWY7 111 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 TMEM160Q9NX00 188 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 TRAV40A0A0B4J280 105 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 GRNP28799 593 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 ZNF575Q86XF7 245 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 TTC9CQ8N5M4 171 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 Q8TAT8 98 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 MRAP2Q96G30 205 aa14.1□□□□□ -0.15
CLSTN3-202ENST00000331148 CDSNQ15517 529 aa14.09□□□□□ -0.15
CLSTN3-202ENST00000331148 MRPL35Q9NZE8 188 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-202ENST00000331148 COL6A6A6NMZ7 2263 aa14.09□□□□□ -0.15
CLSTN3-202ENST00000331148 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.08□□□□□ -0.15
CLSTN3-202ENST00000331148 TMEM178BH3BS89 294 aa14.08□□□□□ -0.15
CLSTN3-202ENST00000331148 CD3EP07766 207 aa14.08□□□□□ -0.15
CLSTN3-202ENST00000331148 HIST1H4GQ99525 98 aa14.08□□□□□ -0.15
CLSTN3-202ENST00000331148 TRAV26-1A0A087WT03 109 aa14.08□□□□□ -0.16
CLSTN3-202ENST00000331148 C17orf100A8MU93 164 aa14.08□□□□□ -0.16
CLSTN3-202ENST00000331148 GATA1P15976 413 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-202ENST00000331148 CNFNQ9BYD5 112 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms