RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RHOGP84095 191 aa13.55□□□□□ -0.24
PTP4A3-201ENST00000329397 IGLV11-55A0A075B6I3 123 aa13.55□□□□□ -0.24
PTP4A3-201ENST00000329397 CACNG7P62955 275 aa13.55□□□□□ -0.24
PTP4A3-201ENST00000329397 MRPL51Q4U2R6 128 aaKnown RBP13.55□□□□□ -0.24
PTP4A3-201ENST00000329397 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
PTP4A3-201ENST00000329397 NAA38Q9BRA0 125 aaKnown RBP13.55□□□□□ -0.24
PTP4A3-201ENST00000329397 MFAP4P55083 255 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 OR1N2Q8NGR9 330 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 SPXQ9BT56 116 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 C21orf62Q9NYP8 219 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 SPTBN4Q9H254 2564 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 GPR183P32249 361 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 ID1P41134 155 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 TWIST1Q15672 202 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 DEFB125Q8N687 156 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 NPYP01303 97 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 FAM104BQ5XKR9 115 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
PTP4A3-201ENST00000329397 TRAV8-6A0A0B4J262 113 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 ERCC8Q13216 396 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 LYPD1Q8N2G4 141 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 LY6G5BQ8NDX9 201 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 NDUFA3O95167 84 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 PRR25Q96S07 402 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 RNF5Q99942 180 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 VKORC1Q9BQB6 163 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 SMAD5-AS1Q9Y6J3 95 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 HIVEP3Q5T1R4 2406 aa13.53□□□□□ -0.24
PTP4A3-201ENST00000329397 IGHV3-49A0A0A0MS15 119 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 CCL21O00585 134 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 COX8AP10176 69 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 CKS1BP61024 79 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 C12orf54Q6X4T0 127 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 ORMDL3Q8N138 153 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 RNF182Q8N6D2 247 aa13.52□□□□□ -0.24
PTP4A3-201ENST00000329397 CHD8Q9HCK8 2581 aa13.52□□□□□ -0.25
PTP4A3-201ENST00000329397 A4D1N5 150 aa13.52□□□□□ -0.25
PTP4A3-201ENST00000329397 PSG9Q00887 426 aa13.52□□□□□ -0.25
PTP4A3-201ENST00000329397 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
PTP4A3-201ENST00000329397 OR11H6Q8NGC7 330 aa13.52□□□□□ -0.25
PTP4A3-201ENST00000329397 PRAC2D3DTV9 90 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 IGHG4P01861 327 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 ORM1P02763 201 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 CKS2P33552 79 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 RPS20P60866 119 aaKnown RBP13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 NPBQ8NG41 125 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 RAB1BQ9H0U4 201 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 NDUFS7O75251 213 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 CTSGP08311 255 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 EVI2AP22794 236 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
PTP4A3-201ENST00000329397 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
PTP4A3-201ENST00000329397 MS4A6AQ9H2W1 248 aa13.5□□□□□ -0.25
PTP4A3-201ENST00000329397 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
PTP4A3-201ENST00000329397 VMO1Q7Z5L0 202 aa13.5□□□□□ -0.25
PTP4A3-201ENST00000329397 ZNF575Q86XF7 245 aa13.5□□□□□ -0.25
PTP4A3-201ENST00000329397 GATD1Q8NB37 220 aa13.5□□□□□ -0.25
PTP4A3-201ENST00000329397 SCGB1A1P11684 91 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 ECSCRQ19T08 205 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 Q6AWC8 147 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 ZNF562Q6V9R5 426 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 THYN1Q9P016 225 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 SS18L2Q9UHA2 77 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 FGF6P10767 208 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 ATP5J2P56134 94 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 PDE6HQ13956 83 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 RABAC1Q9UI14 185 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 ODF3BA8MYP8 253 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 SIVA1O15304 175 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 ZNF207O43670 478 aaKnown RBP13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 AZU1P20160 251 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 SMAGPQ0VAQ4 97 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 TM4SF20Q53R12 229 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 PCP2Q8IVA1 136 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 DPF1Q92782 380 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
PTP4A3-201ENST00000329397 C7orf71A4D174 169 aa13.48□□□□□ -0.25
PTP4A3-201ENST00000329397 ZFP36P26651 326 aaKnown RBP13.48□□□□□ -0.25
PTP4A3-201ENST00000329397 NMUP48645 174 aa13.48□□□□□ -0.25
PTP4A3-201ENST00000329397 TTTY13Q9BZ97 58 aa13.48□□□□□ -0.25
PTP4A3-201ENST00000329397 TNFRSF18Q9Y5U5 241 aa13.48□□□□□ -0.25
PTP4A3-201ENST00000329397 RPL7P18124 248 aaKnown RBP13.48□□□□□ -0.25
PTP4A3-201ENST00000329397 TRBV7-9A0A0J9YWB2 115 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 G3V4G9 280 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 PRTN3P24158 256 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 Q6ZQT7 251 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 FAM110AQ9BQ89 295 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 HBDP02042 147 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 TIMD4Q96H15 378 aa13.47□□□□□ -0.25
PTP4A3-201ENST00000329397 IGHV7-81A0A0B4J1V7 117 aa13.46□□□□□ -0.25
PTP4A3-201ENST00000329397 GAGE12BA1L429 117 aa13.46□□□□□ -0.25
PTP4A3-201ENST00000329397 U3KQK5 164 aa13.46□□□□□ -0.25
PTP4A3-201ENST00000329397 IL17RELQ6ZVW7 336 aa13.46□□□□□ -0.26
PTP4A3-201ENST00000329397 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.26
PTP4A3-201ENST00000329397 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.26
PTP4A3-201ENST00000329397 GTSF1LQ9H1H1 148 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms