RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MT-ATP8P03928 68 aa9.96□□□□□ -0.81
CCDC60-201ENST00000327554 ZNF474Q6S9Z5 364 aaPredicted RBP9.96□□□□□ -0.81
CCDC60-201ENST00000327554 Q6ZS92 163 aa9.96□□□□□ -0.81
CCDC60-201ENST00000327554 NFE4Q86UQ8 179 aa9.96□□□□□ -0.81
CCDC60-201ENST00000327554 Q8N8P6 123 aa9.96□□□□□ -0.81
CCDC60-201ENST00000327554 Q8TAT8 98 aa9.96□□□□□ -0.81
CCDC60-201ENST00000327554 C3orf36Q3SXR2 165 aa9.96□□□□□ -0.82
CCDC60-201ENST00000327554 LYPD2Q6UXB3 125 aa9.96□□□□□ -0.82
CCDC60-201ENST00000327554 A0A087WX48 190 aa9.95□□□□□ -0.82
CCDC60-201ENST00000327554 CD40P25942 277 aa9.95□□□□□ -0.82
CCDC60-201ENST00000327554 LOXP28300 417 aaPredicted RBP9.95□□□□□ -0.82
CCDC60-201ENST00000327554 XGP55808 180 aa9.95□□□□□ -0.82
CCDC60-201ENST00000327554 LCNL1Q6ZST4 164 aa9.95□□□□□ -0.82
CCDC60-201ENST00000327554 FBXL15Q9H469 300 aa9.95□□□□□ -0.82
CCDC60-201ENST00000327554 LOC400499M0QZD8 3231 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 IGHV1-8P0DP01 117 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
CCDC60-201ENST00000327554 Q6ZUT4 128 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 ZNF318Q5VUA4 2279 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 C22orf34Q6ZV56 151 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 CTSZQ9UBR2 303 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 ZZEF1O43149 2961 aa9.94□□□□□ -0.82
CCDC60-201ENST00000327554 NCBP2LA6PVI3 153 aaKnown RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 TNFRSF13BO14836 293 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 NDUFB3O43676 98 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 GATA3P23771 443 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 LPAL2Q16609 132 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 DTX2Q86UW9 622 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 PRSS33Q8NF86 280 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 GLMPQ8WWB7 406 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 RPEQ96AT9 228 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 WDFY4Q6ZS81 3184 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 MBD3L4A6NDZ8 208 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 MBD3L3A6NE82 208 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 MBD3L5A6NJ08 208 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 HOXA3O43365 443 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 NDUFA3O95167 84 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 ORM1P02763 201 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 DLX1P56177 255 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 C5orf64Q2M2E5 130 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 MBD3L2Q8NHZ7 208 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-201ENST00000327554 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 KALRNO60229 2985 aa9.93□□□□□ -0.82
CCDC60-201ENST00000327554 PLNP26678 52 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 DLX4Q92988 240 aaPredicted RBP9.92□□□□□ -0.82
CCDC60-201ENST00000327554 RNF183Q96D59 192 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 TECTAO75443 2155 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 IGHV1-3A0A0C4DH29 117 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 MYMXA0A1B0GTQ4 84 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 IGHG4P01861 327 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
CCDC60-201ENST00000327554 COLQQ9Y215 455 aaPredicted RBP9.92□□□□□ -0.82
CCDC60-201ENST00000327554 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 TMEM178BH3BS89 294 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 PRB3Q04118 309 aaPredicted RBP9.91□□□□□ -0.82
CCDC60-201ENST00000327554 LAGE3Q14657 143 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 NRACQ8N912 160 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 S4R3C0 116 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 C17orf100A8MU93 164 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 IGLV1-47P01700 117 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 EFNA4P52798 201 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 TDHQ8IZJ6 230 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 FDCSPQ8NFU4 85 aa9.91□□□□□ -0.82
CCDC60-201ENST00000327554 TRGV3P03979 118 aa9.9□□□□□ -0.82
CCDC60-201ENST00000327554 LGALS1P09382 135 aaKnown RBP9.9□□□□□ -0.82
CCDC60-201ENST00000327554 HLA-DMBP28068 263 aa9.9□□□□□ -0.82
CCDC60-201ENST00000327554 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
CCDC60-201ENST00000327554 PTH2Q96A98 100 aa9.9□□□□□ -0.82
CCDC60-201ENST00000327554 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.83
CCDC60-201ENST00000327554 GFRALQ6UXV0 394 aa9.9□□□□□ -0.83
CCDC60-201ENST00000327554 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.83
CCDC60-201ENST00000327554 DCHS1Q96JQ0 3298 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 LINC01549A6NIU2 74 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 LINC01548A6NM66 108 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 F8VRH5 84 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 ZNF672Q499Z4 452 aaPredicted RBP9.89□□□□□ -0.83
CCDC60-201ENST00000327554 TRAV12-1A0A0B4J245 112 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 H7C1H1 209 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 ZNF883P0CG24 379 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 UBE2D1P51668 147 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 ZFP2Q6ZN57 461 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 NUP37Q8NFH4 326 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 PPDPFLQ8WWR9 84 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 RAB1BQ9H0U4 201 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 SMAD5-AS1Q9Y6J3 95 aa9.89□□□□□ -0.83
CCDC60-201ENST00000327554 ZGRF1Q86YA3 2104 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 ASPMQ8IZT6 3477 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 LAMTOR5O43504 91 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 PSMB2P49721 201 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 UBE2D3P61077 147 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 UBE2D2P62837 147 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 IL17RELQ6ZVW7 336 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 CCL17Q92583 94 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 F8W735 103 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms