RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 WFDC2Q14508 124 aa13.99□□□□□ -0.17
PRKCB-202ENST00000321728 PSMG4Q5JS54 123 aa13.99□□□□□ -0.17
PRKCB-202ENST00000321728 CEND1Q8N111 149 aa13.99□□□□□ -0.17
PRKCB-202ENST00000321728 IGLV1-47P01700 117 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 ZMAT4Q9H898 229 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 ASH1LQ9NR48 2969 aaKnown RBP13.98□□□□□ -0.17
PRKCB-202ENST00000321728 ABCA4P78363 2273 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 TNFRSF14Q92956 283 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 RNF185Q96GF1 192 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 TMEM160Q9NX00 188 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 GAGE12HA6NDE8 117 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 SHISA9B4DS77 424 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 DPM2O94777 84 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 BMI1P35226 326 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 CD300EQ496F6 205 aaPredicted RBP13.98□□□□□ -0.17
PRKCB-202ENST00000321728 IGFL4Q6B9Z1 124 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 S100A7AQ86SG5 101 aa13.98□□□□□ -0.17
PRKCB-202ENST00000321728 TMEM8BA6NDV4 472 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 J3QR89 54 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 IGLC6P0CF74 106 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 TMEM158Q8WZ71 300 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 NXT2Q9NPJ8 142 aaKnown RBP13.97□□□□□ -0.17
PRKCB-202ENST00000321728 TM2D2Q9BX73 214 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 DYNLRB1Q9NP97 96 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 ZNF292O60281 2723 aa13.97□□□□□ -0.17
PRKCB-202ENST00000321728 THBDP07204 575 aa13.96□□□□□ -0.17
PRKCB-202ENST00000321728 GATA1P15976 413 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-202ENST00000321728 ZNF479Q96JC4 524 aa13.96□□□□□ -0.17
PRKCB-202ENST00000321728 SPANXB1Q9NS25 103 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-202ENST00000321728 KAAG1Q9UBP8 84 aa13.96□□□□□ -0.17
PRKCB-202ENST00000321728 IGLL5B9A064 214 aa13.96□□□□□ -0.18
PRKCB-202ENST00000321728 F8W1H4 67 aa13.96□□□□□ -0.18
PRKCB-202ENST00000321728 H3BMG7 143 aa13.96□□□□□ -0.18
PRKCB-202ENST00000321728 SCGB1A1P11684 91 aa13.96□□□□□ -0.18
PRKCB-202ENST00000321728 FOXI2Q6ZQN5 318 aa13.96□□□□□ -0.18
PRKCB-202ENST00000321728 ARHGAP32A7KAX9 2087 aa13.96□□□□□ -0.18
PRKCB-202ENST00000321728 CEP295Q9C0D2 2601 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 TRAV40A0A0B4J280 105 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 E9PLD3 99 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 PPIFP30405 207 aaKnown RBP13.95□□□□□ -0.18
PRKCB-202ENST00000321728 GFRALQ6UXV0 394 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 PTPRZ1P23471 2315 aaPredicted RBP13.95□□□□□ -0.18
PRKCB-202ENST00000321728 ETDBQ3ZM63 59 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 RAB1BQ9H0U4 201 aa13.95□□□□□ -0.18
PRKCB-202ENST00000321728 MED13LQ71F56 2210 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 C16orf97H3BN30 126 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 ARPC1AQ92747 370 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 AGRNO00468 2067 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 ATP5LO75964 103 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 AMTNQ6UX39 209 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 RNASE6Q93091 150 aaKnown RBP13.94□□□□□ -0.18
PRKCB-202ENST00000321728 SMPXQ9UHP9 88 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 RALYQ9UKM9 306 aaKnown RBP13.94□□□□□ -0.18
PRKCB-202ENST00000321728 SPTA1P02549 2419 aa13.94□□□□□ -0.18
PRKCB-202ENST00000321728 LYNX1G3V0Z9 82 aa13.93□□□□□ -0.18
PRKCB-202ENST00000321728 LYNX1P0DP58 116 aa13.93□□□□□ -0.18
PRKCB-202ENST00000321728 HLA-DMBP28068 263 aa13.93□□□□□ -0.18
PRKCB-202ENST00000321728 COX8CQ7Z4L0 72 aa13.93□□□□□ -0.18
PRKCB-202ENST00000321728 MTURNQ8N3F0 131 aa13.93□□□□□ -0.18
PRKCB-202ENST00000321728 SRSF8Q9BRL6 282 aaKnown RBP13.93□□□□□ -0.18
PRKCB-202ENST00000321728 RPL7P18124 248 aaKnown RBP13.93□□□□□ -0.18
PRKCB-202ENST00000321728 MAPKAPK5-AS1Q8N8E1 139 aa13.93□□□□□ -0.18
PRKCB-202ENST00000321728 MRPL35Q9NZE8 188 aaKnown RBP13.93□□□□□ -0.18
PRKCB-202ENST00000321728 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 TIMM23O14925 209 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 IGHV3-23P01764 117 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 ZNF575Q86XF7 245 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 CACNA1BQ00975 2339 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 MFAP4P55083 255 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 C12orf74Q32Q52 190 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
PRKCB-202ENST00000321728 A0A1B0GV72 72 aa13.91□□□□□ -0.18
PRKCB-202ENST00000321728 SPAG8Q99932 426 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-202ENST00000321728 FABP5P3A8MUU1 101 aa13.91□□□□□ -0.18
PRKCB-202ENST00000321728 VSTM5A8MXK1 200 aa13.91□□□□□ -0.18
PRKCB-202ENST00000321728 SRSF1Q07955 248 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKCB-202ENST00000321728 TLN1Q9Y490 2541 aaKnown RBP13.91□□□□□ -0.18
PRKCB-202ENST00000321728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-202ENST00000321728 DTX2Q86UW9 622 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 TTC9CQ8N5M4 171 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 GAGE13Q4V321 117 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 Q8N8P6 123 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 ATP6V0BQ99437 205 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 RNF5Q99942 180 aa13.9□□□□□ -0.18
PRKCB-202ENST00000321728 IGHV3OR16-8A0A075B7F1 116 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 ERCC8Q13216 396 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 CCDC144NLQ6NUI1 221 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 CNFNQ9BYD5 112 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 WNK2Q9Y3S1 2297 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 A0A0G2JNJ9 132 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 NBR2O15453 112 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 NDUFA3O95167 84 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 Q9UFV3 132 aa13.89□□□□□ -0.19
PRKCB-202ENST00000321728 PIP4P1Q86T03 277 aa13.88□□□□□ -0.19
PRKCB-202ENST00000321728 SPATA25Q9BR10 227 aa13.88□□□□□ -0.19
PRKCB-202ENST00000321728 IGHG4P01861 327 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms