RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 NPFFR1Q9GZQ6 430 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 MRPL18Q9H0U6 180 aaKnown RBP5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 OSTCQ9NRP0 149 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 KLK9Q9UKQ9 250 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 SMIM27A0A1W2PRY6 76 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 UBE2CO00762 179 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 KLHDC1Q8N7A1 406 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 RCHY1Q96PM5 261 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 AGPAT4-IT1Q9H0P7 198 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 NAT8BQ9UHF3 227 aa5.31□□□□□ -1.56
LYSMD3-201ENST00000315948 P01737 135 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 FOXE3Q13461 319 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 PRSS57Q6UWY2 283 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 PEF1Q9UBV8 284 aaKnown RBP5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 U3KQE9 123 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 ADAMTSL5Q6ZMM2 481 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 CLEC5AQ9NY25 188 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 TMEM213A2RRL7 107 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 TSPAN9O75954 239 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 TMEM136Q6ZRR5 245 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 OR10D4PQ8NGN7 298 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 TMEM190Q8WZ59 177 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 C16orf92Q96LL3 132 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 PRR25Q96S07 402 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 PRSS22Q9GZN4 317 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 RPP21Q9H633 154 aaKnown RBP5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 MSRB1Q9NZV6 116 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 LY96Q9Y6Y9 160 aa5.3□□□□□ -1.56
LYSMD3-201ENST00000315948 ARMS2P0C7Q2 107 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 HOXD3P31249 432 aaPredicted RBP5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 C16orf54Q6UWD8 224 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 C9orf139Q6ZV77 190 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 RNF114Q9Y508 228 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 PPP1R2P9O14990 202 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 SH2D1AO60880 128 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 PRM2P04554 102 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 TYMSP04818 313 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 HOXA5P20719 270 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 BTF3L4Q96K17 158 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 C12orf57Q99622 126 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 CYSRT1A8MQ03 144 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 GAS8-AS1O95177 125 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 ZNF138P52744 262 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 LINC00518Q8N0U6 118 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 USMG5Q96IX5 58 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 PRELID1Q9Y255 219 aa5.29□□□□□ -1.56
LYSMD3-201ENST00000315948 NDUFA4O00483 81 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 LY6G6DO95868 133 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 TSKUQ8WUA8 353 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 HIST1H2BLQ99880 126 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 INAFM1C9JVW0 142 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 ZNF688P0C7X2 276 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 CD28P10747 220 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 SRIP30626 198 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 PDE6HQ13956 83 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 PMCHL1Q16048 86 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 PYY3Q5JQD4 70 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 ZNF738Q8NE65 137 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 OR11H1Q8NG94 326 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 DAZAP1Q96EP5 407 aaKnown RBP5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 DAZ1Q9NQZ3 744 aaKnown RBP5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 TIMM8BQ9Y5J9 83 aaPredicted RBP5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 ANK2Q01484 3957 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 IGHV7-4-1A0A0J9YVY3 117 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 AMBPP02760 352 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 CSN1S1P47710 185 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 SOCS3O14543 225 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 NDUFS6O75380 124 aaKnown RBP5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 FAM19A2Q8N3H0 131 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
LYSMD3-201ENST00000315948 A0A0G2JLM5 398 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 SERF1AO75920 110 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 CDX1P47902 265 aaPredicted RBP5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 PSG9Q00887 426 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 FOXC2Q99958 501 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 NAGKQ9UJ70 344 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 IZUMO1RA6ND01 250 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 ORM1P02763 201 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 HIST1H1AQ02539 215 aaPredicted RBP5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 FAM231DQ6ZW35 169 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 KLHL30-AS1Q8NEE0 82 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 SMPXQ9UHP9 88 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 TRAV12-2A0A075B6T6 113 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 LYPD1Q8N2G4 141 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 DEFB104AQ8WTQ1 72 aa5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 DLX4Q92988 240 aaPredicted RBP5.27□□□□□ -1.57
LYSMD3-201ENST00000315948 IGKV3D-20A0A0C4DH25 116 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 SMKR1H3BMG3 65 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 CD5LO43866 347 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 SCGB2A1O75556 95 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 CT45A10P0DMU9 189 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 FXYD7P58549 80 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 LYZL1Q6UWQ5 148 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 CITED2Q99967 270 aaPredicted RBP5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 COL6A5A8TX70 2615 aa5.26□□□□□ -1.57
LYSMD3-201ENST00000315948 NPIPB6E9PJ23 425 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms