RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV3-48P01763 117 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 RPL23P62829 140 aaKnown RBP2.56□□□□□ -2
CLOCK-201ENST00000309964 FAM201AQ5SY85 155 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 PRIMA1Q86XR5 153 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 TMEM243Q9BU79 118 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 ZNF319Q9P2F9 582 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 DMRT1Q9Y5R6 373 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 SMAD5-AS1Q9Y6J3 95 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV3-49A0A0A0MS15 119 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 TRAV12-3A0A0B4J271 114 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 A0A1W2PPI3 338 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 BRD3OSQ6XYD6 125 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 C11orf44Q8N8P7 122 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 LYZL4Q96KX0 146 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV1OR15-1A0A075B7D0 117 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 A0A0A6YYD4 124 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 ATP6V0E1O15342 81 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 DEFB131AP59861 70 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV1-24A0A0C4DH33 117 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 PINLYPA6NC86 204 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 OVOL3O00110 214 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 MYCNOSP40205 109 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 KLHDC3Q9BQ90 382 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV3-66A0A0C4DH42 116 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 K7EM74 188 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 LHBP01229 141 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 CBLN1P23435 193 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 HSD52Q0P140 79 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 SHISA2Q6UWI4 295 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 C18orf15Q96N68 181 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 WFDC6Q9BQY6 131 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV3OR16-13A0A075B7E8 117 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGHV3-74A0A0B4J1X5 117 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 TRAV13-2A0A0B4J235 113 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
CLOCK-201ENST00000309964 COL8A2P25067 703 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 ZNF134P52741 427 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 MUC21Q5SSG8 566 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 CLPSL1A2RUU4 121 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 H0YIZ8 118 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 TMEM170AQ8WVE7 144 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 PRR13Q9NZ81 148 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 SHISA3A0PJX4 238 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 LHFPL4Q7Z7J7 247 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 NPBQ8NG41 125 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 ANAPC10Q9UM13 185 aa2.56□□□□□ -2
CLOCK-201ENST00000309964 IGKV1D-13A0A0B4J2D9 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 IGHV3-23P01764 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 CGB7P0DN87 165 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 IGKV1-13P0DP09 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 GPHB5Q86YW7 130 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 WIPF2Q8TF74 440 aaPredicted RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 RNF126Q9BV68 326 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 TIMM21Q9BVV7 248 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 TMEM126AQ9H061 195 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 AURKAIP1Q9NWT8 199 aaPredicted RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 ACANP16112 2415 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 CEP295Q9C0D2 2601 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 IGHV7-4-1A0A0J9YVY3 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 C22orf46C9J442 243 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 PRSS46E5RG02 174 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 NCR2O95944 276 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 CGB3P0DN86 165 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 TFF3Q07654 80 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 RBMY1FQ15415 496 aaKnown RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 GCSAMLQ5JQS6 135 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 C1orf43Q9BWL3 253 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 IGKV1-16P04430 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 KLRD1Q13241 179 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 TDRG1Q3Y452 100 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 FAM231DQ6ZW35 169 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 NIT1Q86X76 327 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 NDUFAF3Q9BU61 184 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 INS-IGF2F8WCM5 200 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 EFNA2O43921 213 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 DEFB130BP0DP73 79 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 DEFB130AP0DP74 79 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 LYL1P12980 280 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 NFE4Q86UQ8 179 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 SCRT1Q9BWW7 348 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 RNASE7Q9H1E1 156 aaKnown RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 MED19A0JLT2 244 aaPredicted RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 LYNX1G3V0Z9 82 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 ARMS2P0C7Q2 107 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 LYNX1P0DP58 116 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 SNHG12Q9BXW3 62 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 ZNF492Q9P255 531 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 SPCS1Q9Y6A9 102 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 ZNF25P17030 456 aaPredicted RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 CD24P25063 80 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 DDTP30046 118 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 BVES-AS1Q5T3Y7 98 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 C8orf86Q6ZUL3 223 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 NDUFA11Q86Y39 141 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 AMN1Q8IY45 258 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 STPG4Q8N801 248 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 LAMTOR3Q9UHA4 124 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 A8MXK9 166 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms