RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PEMTQ9UBM1 199 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 HEATR1Q9H583 2144 aaKnown RBP4.79□□□□□ -1.64
SEC22A-201ENST00000309934 C9JCJ5 164 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 MT-ATP8P03928 68 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 TRGV3P03979 118 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 IGLL1P15814 213 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 ODF3L1Q8IXM7 274 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 AJUBAQ96IF1 538 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 C18orf15Q96N68 181 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 CFAP54Q96N23 3096 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 A0A0U1RRA0 63 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 RPL35AP18077 110 aaKnown RBP4.79□□□□□ -1.64
SEC22A-201ENST00000309934 NDUFV3P56181 108 aaKnown RBP4.79□□□□□ -1.64
SEC22A-201ENST00000309934 LINC00305Q7Z4B0 112 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 PPDPFLQ8WWR9 84 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 SPG11Q96JI7 2443 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 TRAV2A0A0B4J234 112 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 H3BMG7 143 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 RS1O15537 224 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 CX3CL1P78423 397 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 KLRD1Q13241 179 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 ICAM4Q14773 271 aa4.79□□□□□ -1.64
SEC22A-201ENST00000309934 FAM19A5Q7Z5A7 132 aaPredicted RBP4.79□□□□□ -1.64
SEC22A-201ENST00000309934 A0A1W2PPI3 338 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 A8MWL6 223 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 IGKV1-16P04430 117 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 PRSS1P07477 247 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 FCGR2BP31994 310 aaPredicted RBP4.78□□□□□ -1.64
SEC22A-201ENST00000309934 CCL20P78556 96 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 RIGQ13278 110 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 WFDC2Q14508 124 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 KLF17Q5JT82 389 aaPredicted RBP4.78□□□□□ -1.64
SEC22A-201ENST00000309934 MGST2Q99735 147 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 ZNF580Q9UK33 172 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 P01737 135 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 PRB1P04280 392 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 EDN2P20800 178 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 MFAP2P55001 183 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 LMO4P61968 165 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 ARL16Q0P5N6 197 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 SPRNQ5BIV9 151 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 A0A0C4DFX4 3053 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 LY6LH3BQJ8 138 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 RPL23P62829 140 aaKnown RBP4.78□□□□□ -1.64
SEC22A-201ENST00000309934 MORN3Q6PF18 240 aaPredicted RBP4.78□□□□□ -1.64
SEC22A-201ENST00000309934 TMEM101Q96IK0 257 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 C20orf78Q9BR46 151 aa4.78□□□□□ -1.64
SEC22A-201ENST00000309934 SLC25A39Q9BZJ4 359 aaPredicted RBP4.78□□□□□ -1.64
SEC22A-201ENST00000309934 ELANEP08246 267 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 Q6ZUT4 128 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 ANKRD29Q8N6D5 301 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 COL8A1P27658 744 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-201ENST00000309934 U3KQE9 123 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 PTPN13Q12923 2485 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 TRAV3A0A0B4J244 114 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 NDUFB4O95168 129 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 TMEM78Q5T7P6 136 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 Q6ZPA2 131 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 LSM4Q9Y4Z0 139 aaKnown RBP4.77□□□□□ -1.65
SEC22A-201ENST00000309934 NAV3Q8IVL0 2385 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 OVOL1O14753 267 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 IGLV2-23P01705 113 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 LINC00694P0DN24 101 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 RPL11P62913 178 aaKnown RBP4.77□□□□□ -1.65
SEC22A-201ENST00000309934 FOXE3Q13461 319 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 AMTNQ6UX39 209 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 C22orf34Q6ZV56 151 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 BAALCQ8WXS3 180 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 DLX4Q92988 240 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-201ENST00000309934 OSTCQ9NRP0 149 aa4.77□□□□□ -1.65
SEC22A-201ENST00000309934 LAMA5O15230 3695 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 CFAP47Q6ZTR5 3102 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 H3BUX3 64 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 H7C2G1 150 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PEX7O00628 323 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 BRI3O95415 125 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 TMEM50AO95807 157 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 SNRPD3P62318 126 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PRR20EP86478 221 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PRR20CP86479 221 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PRR20DP86480 221 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PRR20BP86481 221 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PRR20AP86496 221 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 CIARTQ8N365 385 aaPredicted RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 MRPL53Q96EL3 112 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 SHANK2-AS3Q9BTD1 123 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 NXT2Q9NPJ8 142 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PGPA6NDG6 321 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 DUSP14O95147 198 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 REG1AP05451 166 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 PFN1P07737 140 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 ZNF688P0C7X2 276 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 EBLN2Q6P2I7 272 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 RBPMS2Q6ZRY4 209 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 C9orf139Q6ZV77 190 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 Q8N7P7 452 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms