RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 EREGO14944 169 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 S100A9P06702 114 aaKnown RBP5.24□□□□□ -1.57
PTCD2-201ENST00000308077 CSN3P07498 182 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 CSN1S1P47710 185 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 RPL11P62913 178 aaKnown RBP5.24□□□□□ -1.57
PTCD2-201ENST00000308077 FLI1Q01543 452 aaPredicted RBP5.24□□□□□ -1.57
PTCD2-201ENST00000308077 ELOBQ15370 118 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 NSUN5P1Q3KNT7 163 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 PRNTQ86SH4 94 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 ZFP82Q8N141 532 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 GBGT1Q8N5D6 347 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 ARL6IP6Q8N6S5 226 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 C15orf54Q8N8G6 183 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 DCANP1Q8TF63 244 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 SFRP2Q96HF1 295 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 VGLL1Q99990 258 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 TUBA4BQ9H853 241 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 PSG8Q9UQ74 426 aa5.24□□□□□ -1.57
PTCD2-201ENST00000308077 MGST1P10620 155 aaKnown RBP5.23□□□□□ -1.57
PTCD2-201ENST00000308077 BMI1P35226 326 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 DEFB1P60022 68 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 ERCC8Q13216 396 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 LINC00322Q6ZN03 302 aaPredicted RBP5.23□□□□□ -1.57
PTCD2-201ENST00000308077 MRPL53Q96EL3 112 aaKnown RBP5.23□□□□□ -1.57
PTCD2-201ENST00000308077 RNASE7Q9H1E1 156 aaKnown RBP5.23□□□□□ -1.57
PTCD2-201ENST00000308077 MS4A6AQ9H2W1 248 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 PEMTQ9UBM1 199 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 PRELID1Q9Y255 219 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 A0A1B0GUS0 222 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 SERTM2A0A1B0GWG4 89 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 K7EQM0 130 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 MT-ND4LP03901 98 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 NDUFA11Q86Y39 141 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 WFDC3Q8IUB2 231 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 Q8TAT8 98 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 C8orf49Q96NF6 230 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 CTDSP1Q9GZU7 261 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
PTCD2-201ENST00000308077 RBAKDNA6NC62 111 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 H7BYZ3 331 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 PFN1P07737 140 aaKnown RBP5.22□□□□□ -1.57
PTCD2-201ENST00000308077 ZNF705DP0CH99 300 aaPredicted RBP5.22□□□□□ -1.57
PTCD2-201ENST00000308077 ZNF705BP0CI00 300 aaPredicted RBP5.22□□□□□ -1.57
PTCD2-201ENST00000308077 RAB5AP20339 215 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 TFPI2P48307 235 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 FOXL1Q12952 345 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 PRR27Q6MZM9 219 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 TMEM183AQ8IXX5 376 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 ZNF738Q8NE65 137 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 OR10G8Q8NGN5 311 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 SMIM12Q96EX1 92 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 GPR61Q9BZJ8 451 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 V9GYV3 84 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 CXorf65A6NEN9 183 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 K7EQG2 157 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 M0QZ24 198 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 OVOL1O14753 267 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 PF4P02776 101 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 ERVFC1-1P60608 527 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 ZC2HC1AQ96GY0 325 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 AGPAT4-IT1Q9H0P7 198 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 OSTCQ9NRP0 149 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 CLEC5AQ9NY25 188 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 ZFP30Q9Y2G7 519 aa5.22□□□□□ -1.57
PTCD2-201ENST00000308077 C19orf71A6NCJ1 209 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 F6UB75 175 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 PPP1R2P9O14990 202 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 CRIP1P50238 77 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 DEFB114Q30KQ6 69 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 KRTAP24-1Q3LI83 254 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 IBA57Q5T440 356 aaKnown RBP5.21□□□□□ -1.58
PTCD2-201ENST00000308077 FAM231DQ6ZW35 169 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 TMEM61Q8N0U2 210 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 NUDT10Q8NFP7 164 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 NUDT11Q96G61 164 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 PRR25Q96S07 402 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF688P0C7X2 276 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 FAM3BP58499 235 aaPredicted RBP5.21□□□□□ -1.58
PTCD2-201ENST00000308077 CD300EQ496F6 205 aaPredicted RBP5.21□□□□□ -1.58
PTCD2-201ENST00000308077 C9orf47Q6ZRZ4 202 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 COX8CQ7Z4L0 72 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 DYNLRB2Q8TF09 96 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 CITED1Q99966 193 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF492Q9P255 531 aa5.21□□□□□ -1.58
PTCD2-201ENST00000308077 IZUMO1RA6ND01 250 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 FBLL1A6NHQ2 334 aaKnown RBP5.2□□□□□ -1.58
PTCD2-201ENST00000308077 NPIPB6E9PJ23 425 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 CA1P00915 261 aaPredicted RBP5.2□□□□□ -1.58
PTCD2-201ENST00000308077 FRMD6-AS1P0C7T7 363 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 ID1P41134 155 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF80P51504 273 aaPredicted RBP5.2□□□□□ -1.58
PTCD2-201ENST00000308077 PSMG4Q5JS54 123 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 GDF5OSQ5U4N7 250 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 SAMD13Q5VXD3 122 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 OR8A1Q8NGG7 326 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 SIGLEC8Q9NYZ4 499 aa5.2□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF705GA8MUZ8 300 aaPredicted RBP5.19□□□□□ -1.58
PTCD2-201ENST00000308077 PHOX2AO14813 284 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 GATCO43716 136 aaKnown RBP5.19□□□□□ -1.58
PTCD2-201ENST00000308077 CT45A10P0DMU9 189 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms