RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NDUFB1O75438 58 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 ZNF837Q96EG3 531 aaPredicted RBP10.92□□□□□ -0.66
TRIM56-201ENST00000306085 IGKV3D-7A0A0C4DH55 119 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 SIPA1L1O43166 1804 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 IGKV1D-43A0A0B4J1Z2 117 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 ARMS2P0C7Q2 107 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 TMEM213A2RRL7 107 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 RNF114Q9Y508 228 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 HLA-DRB4P13762 266 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 LY6G6FQ5SQ64 297 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 HLA-DRB4X5D2U9 266 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 H3BUX3 64 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 XCL1P47992 114 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 ANAPC1Q9H1A4 1944 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 FAM166AQ6J272 317 aa10.91□□□□□ -0.66
TRIM56-201ENST00000306085 SAP25Q8TEE9 199 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 FAM223BA6NKX1 122 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 LINC00271P0C7V0 271 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 FAM223AQ8IWN6 122 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 USMG5Q96IX5 58 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 PRSS47A8MTI9 375 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 IGHV1-3A0A0C4DH29 117 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.66
TRIM56-201ENST00000306085 C9orf106Q8NAJ2 232 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 PSMB8P28062 276 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 C2orf66Q6UXQ4 117 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 Q86TA4 180 aa10.9□□□□□ -0.66
TRIM56-201ENST00000306085 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 C20orf144Q9BQM9 153 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 F8P00451 2351 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 IGKV1-39P01597 117 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 IGKV1D-39P04432 117 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 AMTNQ6UX39 209 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 H0YIZ8 118 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 TMEM200BQ69YZ2 307 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
TRIM56-201ENST00000306085 FAM236AA0A1B0GUQ0 79 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 PLXNA3P51805 1871 aa10.89□□□□□ -0.67
TRIM56-201ENST00000306085 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 A0A087WW49 117 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
TRIM56-201ENST00000306085 SIGLEC9Q9Y336 463 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 IGHV1OR15-1A0A075B7D0 117 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 TRAV3A0A0B4J244 114 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 DEFB131AP59861 70 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 BVES-AS1Q5T3Y7 98 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 IGKV2D-24A0A075B6R9 120 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 ETDCA0A1B0GVM5 59 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 LINC00479Q96M42 142 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 RFNGQ9Y644 331 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 COX7B2Q8TF08 81 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 BTCP35070 178 aa10.88□□□□□ -0.67
TRIM56-201ENST00000306085 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 WDR83OSQ9Y284 106 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 SHISA3A0PJX4 238 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 IGHV1-24A0A0C4DH33 117 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
TRIM56-201ENST00000306085 FGF16O43320 207 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 MPLKIPQ8TAP9 179 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 WBP1Q96G27 269 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 K7ERS5 55 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 VSIG2Q96IQ7 327 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 A0A1B0GW64 132 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 HGFACQ04756 655 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
TRIM56-201ENST00000306085 IGKV1OR2-108A0A075B7D4 117 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 IGHV2-70P01814 119 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 IGHV1-8P0DP01 117 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 PAX9P55771 341 aa10.87□□□□□ -0.67
TRIM56-201ENST00000306085 HERVK_113P63121 156 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 C5orf64Q2M2E5 130 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 Q9HAA7 133 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 SDHAF1A6NFY7 115 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 Q8N8P6 123 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 NMSQ5H8A3 153 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 RPP25LQ8N5L8 163 aaKnown RBP10.86□□□□□ -0.67
TRIM56-201ENST00000306085 ATOX1O00244 68 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-201ENST00000306085 FBLN5Q9UBX5 448 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
TRIM56-201ENST00000306085 ITGBL1O95965 494 aaPredicted RBP10.85□□□□□ -0.67
TRIM56-201ENST00000306085 COX8AP10176 69 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 J3QQQ9 107 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.85□□□□□ -0.67
TRIM56-201ENST00000306085 LYZL4Q96KX0 146 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 MBD3L4A6NDZ8 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM56-201ENST00000306085 MBD3L3A6NE82 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM56-201ENST00000306085 MBD3L5A6NJ08 208 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms