RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 PRIMA1Q86XR5 153 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 NSD1Q96L73 2696 aaPredicted RBP11.03□□□□□ -0.64
RAB40A-201ENST00000304236 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 NDUFS7O75251 213 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 Q6ZN92 141 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.64
RAB40A-201ENST00000304236 BMI1P35226 326 aa11.02□□□□□ -0.65
RAB40A-201ENST00000304236 COL5A1-AS1Q5SY13 56 aa11.02□□□□□ -0.65
RAB40A-201ENST00000304236 AJUBAQ96IF1 538 aa11.02□□□□□ -0.65
RAB40A-201ENST00000304236 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
RAB40A-201ENST00000304236 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
RAB40A-201ENST00000304236 SYS1-DBNDD2H3BUS1 97 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 SH2D1AO60880 128 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 IGHV4-39P01824 125 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 LMO4P61968 165 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 SRSF2Q01130 221 aaKnown RBP11.01□□□□□ -0.65
RAB40A-201ENST00000304236 RELQ04864 619 aaPredicted RBP11.01□□□□□ -0.65
RAB40A-201ENST00000304236 PRR25Q96S07 402 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
RAB40A-201ENST00000304236 VPS13CQ709C8 3753 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 A0A087X0K7 114 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 PET117Q6UWS5 81 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 ATOH7Q8N100 152 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 MAPK1IP1LQ8NDC0 245 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 SMAD5-AS1Q9Y6J3 95 aa11.01□□□□□ -0.65
RAB40A-201ENST00000304236 M0QZ24 198 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 CRLF1O75462 422 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 SAA4P35542 130 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 C15orf32Q32M92 178 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 PRR31Q5SQ13 230 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 ASCL2Q99929 193 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 WNK2Q9Y3S1 2297 aa11□□□□□ -0.65
RAB40A-201ENST00000304236 IGKV2-40A0A087WW87 121 aaPredicted RBP10.99□□□□□ -0.65
RAB40A-201ENST00000304236 IGKV2D-40P01614 121 aaPredicted RBP10.99□□□□□ -0.65
RAB40A-201ENST00000304236 RHOGP84095 191 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 KRTAP1-1Q07627 177 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 LAMTOR2Q9Y2Q5 125 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 TLN2Q9Y4G6 2542 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 OR4C46A6NHA9 309 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 NPFFO15130 113 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 GPR183P32249 361 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 BATFQ16520 125 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 LYZL1Q6UWQ5 148 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 FA2HQ7L5A8 372 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 EEF1AKMT3Q96AZ1 226 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 TPPP3Q9BW30 176 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 BPESC1Q9GZL8 116 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 AP5S1Q9NUS5 200 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 JMJD1CQ15652 2540 aa10.99□□□□□ -0.65
RAB40A-201ENST00000304236 CLEC3BP05452 202 aa10.98□□□□□ -0.65
RAB40A-201ENST00000304236 IGLL1P15814 213 aa10.98□□□□□ -0.65
RAB40A-201ENST00000304236 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
RAB40A-201ENST00000304236 TSPOP30536 169 aa10.98□□□□□ -0.65
RAB40A-201ENST00000304236 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
RAB40A-201ENST00000304236 SLC50A1Q9BRV3 221 aa10.98□□□□□ -0.65
RAB40A-201ENST00000304236 U3KQK5 164 aa10.98□□□□□ -0.65
RAB40A-201ENST00000304236 TRBV7-1A0A0A6YYK4 115 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 BUB3O43684 328 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 CD5LO43866 347 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 DSCR9P59020 149 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 GAGE1Q13065 139 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 FAM104BQ5XKR9 115 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 MDFIQ99750 246 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 HSBP1L1C9JCN9 74 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 IGHG4P01861 327 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 MAJINQ3KP22 176 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 YAE1D1Q9NRH1 226 aa10.97□□□□□ -0.65
RAB40A-201ENST00000304236 CSN3P07498 182 aa10.96□□□□□ -0.65
RAB40A-201ENST00000304236 G0S2P27469 103 aa10.96□□□□□ -0.65
RAB40A-201ENST00000304236 ZNF138P52744 262 aa10.96□□□□□ -0.65
RAB40A-201ENST00000304236 CLEC2AQ6UVW9 174 aa10.96□□□□□ -0.65
RAB40A-201ENST00000304236 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
RAB40A-201ENST00000304236 VGLL1Q99990 258 aa10.96□□□□□ -0.65
RAB40A-201ENST00000304236 TMSB15BA0A087X1C1 80 aa10.96□□□□□ -0.66
RAB40A-201ENST00000304236 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.66
RAB40A-201ENST00000304236 ORMDL3Q8N138 153 aa10.96□□□□□ -0.66
RAB40A-201ENST00000304236 FER1L6-AS1Q8NA97 138 aa10.96□□□□□ -0.66
RAB40A-201ENST00000304236 IGHV4-30-2A0A087WSY4 118 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 FABP5P3A8MUU1 101 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 DLEU1O43261 78 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 IGLC6P0CF74 106 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 C5orf56Q8N8D9 126 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 MRPL53Q96EL3 112 aaKnown RBP10.95□□□□□ -0.66
RAB40A-201ENST00000304236 PRELID3AQ96N28 172 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
RAB40A-201ENST00000304236 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms