RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ATP5LO75964 103 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 SH3BGRL2Q9UJC5 107 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 SHISA9B4DS77 424 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 SYT8Q8NBV8 401 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 IGFBPL1Q8WX77 278 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 IGHV3OR16-8A0A075B7F1 116 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 TRAV17A0A0B4J275 112 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 C17orf100A8MU93 164 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 MYOZ3Q8TDC0 251 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 WNK2Q9Y3S1 2297 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 IGHV1-3A0A0C4DH29 117 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 ZNF502Q8TBZ5 544 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 PRO0461Q9UI25 63 aa10.17□□□□□ -0.78
TVP23A-201ENST00000299866 TMEM178BH3BS89 294 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 IGHV3-23P01764 117 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 IGLC6P0CF74 106 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 CYSLTR1Q9Y271 337 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 EFNA4P52798 201 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 SRSF1Q07955 248 aaKnown RBP eCLIP10.16□□□□□ -0.78
TVP23A-201ENST00000299866 C1orf210Q8IVY1 113 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 RPEQ96AT9 228 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 TECTAO75443 2155 aa10.16□□□□□ -0.78
TVP23A-201ENST00000299866 TRAV26-2A0A0B4J265 109 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 CEACAM4O75871 244 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 DLX6P56179 175 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 TMEM155Q4W5P6 130 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 PCNX1Q96RV3 2341 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 MBD3L4A6NDZ8 208 aaPredicted RBP10.15□□□□□ -0.78
TVP23A-201ENST00000299866 MBD3L3A6NE82 208 aaPredicted RBP10.15□□□□□ -0.78
TVP23A-201ENST00000299866 MBD3L5A6NJ08 208 aaPredicted RBP10.15□□□□□ -0.78
TVP23A-201ENST00000299866 SPINK8P0C7L1 97 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 ERCC8Q13216 396 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 TCTEX1D4Q5JR98 221 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 DTX2Q86UW9 622 aa10.15□□□□□ -0.78
TVP23A-201ENST00000299866 MBD3L2Q8NHZ7 208 aaPredicted RBP10.15□□□□□ -0.78
TVP23A-201ENST00000299866 NCBP2LA6PVI3 153 aaKnown RBP10.15□□□□□ -0.79
TVP23A-201ENST00000299866 KLK15Q9H2R5 256 aa10.15□□□□□ -0.79
TVP23A-201ENST00000299866 ZZEF1O43149 2961 aa10.15□□□□□ -0.79
TVP23A-201ENST00000299866 IGHV3-35A0A0C4DH35 117 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 C8orf31Q8N9H6 132 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 DMXL2Q8TDJ6 3036 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 VSTM5A8MXK1 200 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 C8orf86Q6ZUL3 223 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 ZNF418Q8TF45 676 aaPredicted RBP10.14□□□□□ -0.79
TVP23A-201ENST00000299866 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 UFC1Q9Y3C8 167 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 MT-ATP8P03928 68 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 FOXI1Q12951 378 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 ADIPOQQ15848 244 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 Q8N8P6 123 aa10.14□□□□□ -0.79
TVP23A-201ENST00000299866 MRPL16Q9NX20 251 aaKnown RBP10.14□□□□□ -0.79
TVP23A-201ENST00000299866 HOXA3O43365 443 aaPredicted RBP10.13□□□□□ -0.79
TVP23A-201ENST00000299866 TRGV3P03979 118 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 PDE6HQ13956 83 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 PTH2Q96A98 100 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 CD59P13987 128 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 PSMB2P49721 201 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 TAL2Q16559 108 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 FAM215AQ9Y5M1 114 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 ZGRF1Q86YA3 2104 aa10.13□□□□□ -0.79
TVP23A-201ENST00000299866 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 BUB1B-PAK6H3BSN5 160 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 A0A087WX48 190 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 OR11H12B2RN74 326 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 THBDP07204 575 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 LAGE3Q14657 143 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
TVP23A-201ENST00000299866 OR11H1Q8NG94 326 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 CDIP1Q9H305 208 aa10.12□□□□□ -0.79
TVP23A-201ENST00000299866 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
TVP23A-201ENST00000299866 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
TVP23A-201ENST00000299866 CNOT1A5YKK6 2376 aaKnown RBP10.11□□□□□ -0.79
TVP23A-201ENST00000299866 SMCPP49901 116 aaPredicted RBP10.11□□□□□ -0.79
TVP23A-201ENST00000299866 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
TVP23A-201ENST00000299866 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
TVP23A-201ENST00000299866 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
TVP23A-201ENST00000299866 DEFB109BQ30KR1 87 aa10.11□□□□□ -0.79
TVP23A-201ENST00000299866 TACC2O95359 2948 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
TVP23A-201ENST00000299866 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 CFHR4Q92496 578 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 TGFAP01135 160 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 IGLV1-47P01700 117 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 ZNF883P0CG24 379 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
TVP23A-201ENST00000299866 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 GATA3P23771 443 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms