RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
SPIDR-201ENST00000297423 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
SPIDR-201ENST00000297423 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
SPIDR-201ENST00000297423 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
SPIDR-201ENST00000297423 ZNF474Q6S9Z5 364 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-201ENST00000297423 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
SPIDR-201ENST00000297423 C8orf46Q8TAG6 207 aa11.8□□□□□ -0.52
SPIDR-201ENST00000297423 CCDC144NLQ6NUI1 221 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-201ENST00000297423 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 LGALS9BQ3B8N2 356 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 LGALS9CQ6DKI2 356 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 IGKV1D-37A0A075B6S9 117 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 C16orf97H3BN30 126 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 NGBQ9NPG2 151 aa11.79□□□□□ -0.52
SPIDR-201ENST00000297423 ZNF785A8K8V0 405 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 VSTM5A8MXK1 200 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 PRR30Q53SZ7 412 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-201ENST00000297423 PTH2Q96A98 100 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 C19orf71A6NCJ1 209 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
SPIDR-201ENST00000297423 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 VKORC1Q9BQB6 163 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 SH2D1AO60880 128 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
SPIDR-201ENST00000297423 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 ZNF492Q9P255 531 aa11.78□□□□□ -0.52
SPIDR-201ENST00000297423 MLST8Q9BVC4 326 aa11.77□□□□□ -0.52
SPIDR-201ENST00000297423 PRSS22Q9GZN4 317 aa11.77□□□□□ -0.52
SPIDR-201ENST00000297423 SPRY2O43597 315 aa11.77□□□□□ -0.52
SPIDR-201ENST00000297423 SCGB2A1O75556 95 aa11.77□□□□□ -0.52
SPIDR-201ENST00000297423 DPM2O94777 84 aa11.77□□□□□ -0.52
SPIDR-201ENST00000297423 PGPEP1Q9NXJ5 209 aa11.77□□□□□ -0.52
SPIDR-201ENST00000297423 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.53
SPIDR-201ENST00000297423 SMIM17P0DL12 118 aa11.77□□□□□ -0.53
SPIDR-201ENST00000297423 FGF6P10767 208 aa11.77□□□□□ -0.53
SPIDR-201ENST00000297423 EMP1P54849 157 aa11.77□□□□□ -0.53
SPIDR-201ENST00000297423 GFRA4Q9GZZ7 299 aa11.77□□□□□ -0.53
SPIDR-201ENST00000297423 CT83Q5H943 113 aa11.77□□□□□ -0.53
SPIDR-201ENST00000297423 MRPL35Q9NZE8 188 aaKnown RBP11.77□□□□□ -0.53
SPIDR-201ENST00000297423 TRAV26-2A0A0B4J265 109 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 OR11H12B2RN74 326 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 KLRB1Q12918 225 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 Q8NA96 180 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 OR11H1Q8NG94 326 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 ANAPC13Q9BS18 74 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 C1orf122Q6ZSJ8 110 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 A0A0G2JNJ9 132 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 IGLL5B9A064 214 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 EFNA4P52798 201 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 ATP5IP56385 69 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-201ENST00000297423 Q1RN00 199 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 Q9UFV3 132 aa11.76□□□□□ -0.53
SPIDR-201ENST00000297423 PRTN3P24158 256 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 APOBEC3AP31941 199 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-201ENST00000297423 C7orf69Q9H7B7 122 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 BEX4Q9NWD9 120 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-201ENST00000297423 GAS8-AS1O95177 125 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 ZFHX4Q86UP3 3567 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 GP9P14770 177 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 CEND1Q8N111 149 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 TMEM167AQ8TBQ9 72 aa11.75□□□□□ -0.53
SPIDR-201ENST00000297423 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
SPIDR-201ENST00000297423 HLA-DMBP28068 263 aa11.74□□□□□ -0.53
SPIDR-201ENST00000297423 SPANXN1Q5VSR9 72 aa11.74□□□□□ -0.53
SPIDR-201ENST00000297423 LOC400499M0QZD8 3231 aa11.74□□□□□ -0.53
SPIDR-201ENST00000297423 TMEM200BQ69YZ2 307 aa11.74□□□□□ -0.53
SPIDR-201ENST00000297423 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
SPIDR-201ENST00000297423 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-201ENST00000297423 IGLV1-44P01699 117 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 IGHV1-46P01743 117 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 MC5RP33032 325 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 KLF12Q9Y4X4 402 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-201ENST00000297423 GLRXP35754 106 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 LYPD2Q6UXB3 125 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 FOXI2Q6ZQN5 318 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 MRAP2Q96G30 205 aa11.73□□□□□ -0.53
SPIDR-201ENST00000297423 F8W1H4 67 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 MGPP08493 103 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 TRGV9Q99603 122 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 SPANXB1Q9NS25 103 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-201ENST00000297423 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 FAM90A27PA6NNH2 459 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 B5MCH6 92 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 CCL21O00585 134 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 TNFRSF6BO95407 300 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 ERCC8Q13216 396 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 ONECUT1Q9UBC0 465 aa11.72□□□□□ -0.53
SPIDR-201ENST00000297423 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-201ENST00000297423 S100A4P26447 101 aaKnown RBP11.71□□□□□ -0.53
SPIDR-201ENST00000297423 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
SPIDR-201ENST00000297423 LINC00312Q9Y6C7 94 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1023.8 ms