RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 UNQ9165/PRO28630Q6UXU0 137 aa9.07□□□□□ -0.96
RHO-201ENST00000296271 RNF24Q9Y225 148 aa9.07□□□□□ -0.96
RHO-201ENST00000296271 TRBV6-1A0A0K0K1D8 114 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 SMKR1H3BMG3 65 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
RHO-201ENST00000296271 IL17RELQ6ZVW7 336 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 OR4B1Q8NGF8 309 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 BBC3Q96PG8 261 aaPredicted RBP9.06□□□□□ -0.96
RHO-201ENST00000296271 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 TRAV41A0A0B4J266 112 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 TMEM189A5PLL7 270 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 EDN2P20800 178 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 CTRLP40313 264 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 PSG9Q00887 426 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 BATFQ16520 125 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
RHO-201ENST00000296271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
RHO-201ENST00000296271 TRAV8-2A0A0B4J237 113 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 A1L4Q6 167 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 TRGV3P03979 118 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 NAV2Q8IVL1 2488 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 IGKV3-7A0A075B6H7 116 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 TXN2Q99757 166 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 MOB4Q9Y3A3 225 aa9.05□□□□□ -0.96
RHO-201ENST00000296271 J3KRW8 73 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 SMAD7O15105 426 aaKnown RBP9.04□□□□□ -0.96
RHO-201ENST00000296271 SPRY2O43597 315 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 GOSR1O95249 250 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 IGF1P05019 195 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 LINC00614P0C842 121 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 CLEC2AQ6UVW9 174 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 EEF1AKMT3Q96AZ1 226 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 C11orf21Q9P2W6 132 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 SORL1Q92673 2214 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 FAM231BA6NCW3 169 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 NCR2O95944 276 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 ORM1P02763 201 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 ATP5G2Q06055 141 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 C19orf54Q5BKX5 351 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
RHO-201ENST00000296271 UBR5O95071 2799 aaPredicted RBP9.04□□□□□ -0.96
RHO-201ENST00000296271 RAB4AP20338 218 aa9.03□□□□□ -0.96
RHO-201ENST00000296271 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
RHO-201ENST00000296271 PSMG3-AS1Q96PY0 264 aa9.03□□□□□ -0.96
RHO-201ENST00000296271 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
RHO-201ENST00000296271 D6R8Y8 96 aa9.03□□□□□ -0.96
RHO-201ENST00000296271 NDFIP1Q9BT67 221 aa9.03□□□□□ -0.96
RHO-201ENST00000296271 SONP18583 2426 aaKnown RBP9.03□□□□□ -0.96
RHO-201ENST00000296271 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
RHO-201ENST00000296271 RIGQ13278 110 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 C20orf173Q96LM9 149 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 CREBBPQ92793 2442 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 hDV102S1A0JD36 115 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 MSMBP08118 114 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 TFPI2P48307 235 aa9.02□□□□□ -0.97
RHO-201ENST00000296271 M0R143 59 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 IGLL1P15814 213 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 SRD5A1P18405 259 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 ARL3P36405 182 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 TWIST1Q15672 202 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 S100A7AQ86SG5 101 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 MYO9AB2RTY4 2548 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 IGLC3P0DOY3 106 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 PF4V1P10720 104 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 SRSF1Q07955 248 aaKnown RBP eCLIP9.01□□□□□ -0.97
RHO-201ENST00000296271 FOXE3Q13461 319 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 PRR9Q5T870 116 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 METTL26Q96S19 204 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 MEGF9Q9H1U4 602 aa9.01□□□□□ -0.97
RHO-201ENST00000296271 GATA1P15976 413 aaPredicted RBP9□□□□□ -0.97
RHO-201ENST00000296271 KRTAP10-9P60411 292 aa9□□□□□ -0.97
RHO-201ENST00000296271 KLK9Q2XQG4 91 aa9□□□□□ -0.97
RHO-201ENST00000296271 MRPL51Q4U2R6 128 aaKnown RBP9□□□□□ -0.97
RHO-201ENST00000296271 SAPCD1Q5SSQ6 148 aa9□□□□□ -0.97
RHO-201ENST00000296271 KLK9Q9UKQ9 250 aa9□□□□□ -0.97
RHO-201ENST00000296271 NF1P21359 2839 aa9□□□□□ -0.97
RHO-201ENST00000296271 APCP25054 2843 aa9□□□□□ -0.97
RHO-201ENST00000296271 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
RHO-201ENST00000296271 F6UB75 175 aa9□□□□□ -0.97
RHO-201ENST00000296271 SCGB2A1O75556 95 aa9□□□□□ -0.97
RHO-201ENST00000296271 G0S2P27469 103 aa9□□□□□ -0.97
RHO-201ENST00000296271 TCTAP57738 103 aa9□□□□□ -0.97
RHO-201ENST00000296271 KIR3DS1Q14943 382 aa9□□□□□ -0.97
RHO-201ENST00000296271 GPHB5Q86YW7 130 aa9□□□□□ -0.97
RHO-201ENST00000296271 FER1L6-AS1Q8NA97 138 aa9□□□□□ -0.97
RHO-201ENST00000296271 TMEM70Q9BUB7 260 aa9□□□□□ -0.97
RHO-201ENST00000296271 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
RHO-201ENST00000296271 A0A096LNJ9 63 aa8.99□□□□□ -0.97
RHO-201ENST00000296271 A6NDX4 124 aa8.99□□□□□ -0.97
RHO-201ENST00000296271 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms