RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 GOSR1O95249 250 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 IGHG4P01861 327 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 PPIFP30405 207 aaKnown RBP12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 FXYD7P58549 80 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 CCL19Q99731 98 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 C20orf202A1L168 122 aa12.23□□□□□ -0.45
NCKIPSD-201ENST00000294129 IGLL1P15814 213 aa12.23□□□□□ -0.45
NCKIPSD-201ENST00000294129 NDFIP1Q9BT67 221 aa12.23□□□□□ -0.45
NCKIPSD-201ENST00000294129 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
NCKIPSD-201ENST00000294129 C5orf56Q8N8D9 126 aa12.23□□□□□ -0.45
NCKIPSD-201ENST00000294129 ZANQ9Y493 2812 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 ZFAND3Q9H8U3 227 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 CCL25O15444 150 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 BUB3O43684 328 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 IGHV4-38-2P0DP08 117 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 TWIST1Q15672 202 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 NRGNQ92686 78 aa12.22□□□□□ -0.45
NCKIPSD-201ENST00000294129 TRAV9-2A0A087WT02 112 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 D6R8Y8 96 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 FAM106AQ4KMX7 169 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 EEF1AKMT3Q96AZ1 226 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 hDV102S1A0JD36 115 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 OR4C46A6NHA9 309 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 ATP5J2P56134 94 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
NCKIPSD-201ENST00000294129 LCNL1Q6ZST4 164 aa12.21□□□□□ -0.46
NCKIPSD-201ENST00000294129 IL17RELQ6ZVW7 336 aa12.21□□□□□ -0.46
NCKIPSD-201ENST00000294129 CHCHD1Q96BP2 118 aaKnown RBP12.21□□□□□ -0.46
NCKIPSD-201ENST00000294129 J3KRW8 73 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 NCR2O95944 276 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 TRGV3P03979 118 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 PIMREGQ9BSJ6 248 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 MSRB1Q9NZV6 116 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 TRAV41A0A0B4J266 112 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 CLPSL1A2RUU4 121 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 ATP5G2Q06055 141 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-201ENST00000294129 ZNF462Q96JM2 2506 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 IGKV3-7A0A075B6H7 116 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 IGHV1-69DA0A0B4J2H0 117 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 IGHV1-69P01742 117 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 METTL26Q96S19 204 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 IGHV4-30-2A0A087WSY4 118 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 LOXL1Q08397 574 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 MOB4Q9Y3A3 225 aa12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 MRPS16Q9Y3D3 137 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-201ENST00000294129 PCP4P48539 62 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 ERASQ7Z444 233 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 ABCA12Q86UK0 2595 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 CREBBPQ92793 2442 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 TCTAP57738 103 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 Q6AWC8 147 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 ORAOV1Q8WV07 137 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 MAP1LC3CQ9BXW4 147 aa12.18□□□□□ -0.46
NCKIPSD-201ENST00000294129 H3BUX3 64 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 PAX8Q06710 450 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 Q6ZQT7 251 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 COX11Q9Y6N1 276 aa12.17□□□□□ -0.46
NCKIPSD-201ENST00000294129 BMI1P35226 326 aa12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 OR8A1Q8NGG7 326 aa12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 DEFB1P60022 68 aa12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 RPL11P62913 178 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 MRPL51Q4U2R6 128 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-201ENST00000294129 TRBV7-1A0A0A6YYK4 115 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 S100A7P31151 101 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 CKS2P33552 79 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 FAM104BQ5XKR9 115 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 Q6ZS46 218 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 C8orf86Q6ZUL3 223 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 BLCAPP62952 87 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 AGPAT4-IT1Q9H0P7 198 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 TLN2Q9Y4G6 2542 aa12.15□□□□□ -0.46
NCKIPSD-201ENST00000294129 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.47
NCKIPSD-201ENST00000294129 ARL3P36405 182 aa12.15□□□□□ -0.47
NCKIPSD-201ENST00000294129 UBE2V1Q13404 147 aa12.15□□□□□ -0.47
NCKIPSD-201ENST00000294129 ORMDL3Q8N138 153 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms