RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HEATR1Q9H583 2144 aaKnown RBP10.18□□□□□ -0.78
PTCD1-201ENST00000292478 ELANEP08246 267 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 TDGF1P3P51864 188 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 C6orf226Q5I0X4 101 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
PTCD1-201ENST00000292478 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 SHISA9B4DS77 424 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 ZNF124Q15973 351 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 MRPL51Q4U2R6 128 aaKnown RBP10.17□□□□□ -0.78
PTCD1-201ENST00000292478 HEATR5AQ86XA9 2040 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 CEP250Q9BV73 2442 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 IGHV2-5P01817 119 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 LGALS9BQ3B8N2 356 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 LGALS9CQ6DKI2 356 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 PYGO2Q9BRQ0 406 aa10.17□□□□□ -0.78
PTCD1-201ENST00000292478 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
PTCD1-201ENST00000292478 PMVKQ15126 192 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 CDKN1BP46527 198 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 LTAP01374 205 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 OR11H6Q8NGC7 330 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 ZNF114Q8NC26 417 aa10.16□□□□□ -0.78
PTCD1-201ENST00000292478 IGHV7-4-1A0A0J9YVY3 117 aa10.15□□□□□ -0.78
PTCD1-201ENST00000292478 LYPD6Q86Y78 171 aa10.15□□□□□ -0.78
PTCD1-201ENST00000292478 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
PTCD1-201ENST00000292478 SPTBN2O15020 2390 aa10.15□□□□□ -0.78
PTCD1-201ENST00000292478 RBAKDNA6NC62 111 aa10.15□□□□□ -0.78
PTCD1-201ENST00000292478 IGLC7A0M8Q6 106 aa10.15□□□□□ -0.79
PTCD1-201ENST00000292478 PRIMA1Q86XR5 153 aa10.15□□□□□ -0.79
PTCD1-201ENST00000292478 WIPF2Q8TF74 440 aaPredicted RBP10.15□□□□□ -0.79
PTCD1-201ENST00000292478 LENEPQ9Y5L5 61 aa10.15□□□□□ -0.79
PTCD1-201ENST00000292478 CNOT1A5YKK6 2376 aaKnown RBP10.14□□□□□ -0.79
PTCD1-201ENST00000292478 SLAQ13239 276 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 SPINK13Q1W4C9 94 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 SPAG8Q99932 426 aaPredicted RBP10.14□□□□□ -0.79
PTCD1-201ENST00000292478 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 SPXQ9BT56 116 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 ANXA2RQ3ZCQ2 193 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 PRSS33Q8NF86 280 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 HOXB4P17483 251 aaPredicted RBP10.14□□□□□ -0.79
PTCD1-201ENST00000292478 GATD1Q8NB37 220 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 COX11Q9Y6N1 276 aa10.14□□□□□ -0.79
PTCD1-201ENST00000292478 TCTEX1D4Q5JR98 221 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 Q96MF0 132 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 ANAPC13Q9BS18 74 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 IGHV1-24A0A0C4DH33 117 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 CR1LQ2VPA4 569 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 STPG4Q8N801 248 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 TRBV25-1A0A075B6N4 114 aa10.13□□□□□ -0.79
PTCD1-201ENST00000292478 FGF23Q9GZV9 251 aaPredicted RBP10.13□□□□□ -0.79
PTCD1-201ENST00000292478 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 K7EMI3 77 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 NPBQ8NG41 125 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 KIAA2026Q5HYC2 2103 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 C22orf46C9J442 243 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 NPC2P61916 151 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE2EQ4V326 116 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE2DQ9UEU5 116 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 Q6ZWC4 215 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 DIDO1Q9BTC0 2240 aaKnown RBP10.12□□□□□ -0.79
PTCD1-201ENST00000292478 PRSS57Q6UWY2 283 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
PTCD1-201ENST00000292478 MCRIP2Q9BUT9 160 aaKnown RBP10.11□□□□□ -0.79
PTCD1-201ENST00000292478 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 PLXND1Q9Y4D7 1925 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 AZU1P20160 251 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
PTCD1-201ENST00000292478 COX8AP10176 69 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
PTCD1-201ENST00000292478 ZFAND6Q6FIF0 208 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 BOD1L2Q8IYS8 172 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 PLXNB3Q9ULL4 1909 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 TAL2Q16559 108 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
PTCD1-201ENST00000292478 PSCAO43653 123 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 FAM120AOSQ5T036 256 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 KLK9Q9UKQ9 250 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 A0A1B0GUS0 222 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms