RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 MZT2BQ6NZ67 158 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 Q6ZTI0 123 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 EIF4E3Q8N5X7 224 aaKnown RBP9.76□□□□□ -0.85
TPM1-202ENST00000288398 TMEM252Q8N6L7 170 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 UPK3BQ9BT76 320 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 Q9H3A6 140 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 MRPS16Q9Y3D3 137 aaKnown RBP9.76□□□□□ -0.85
TPM1-202ENST00000288398 MUC4Q99102 2169 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 M0R3E3 92 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 RGS13O14921 159 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 MAPKAPK5-AS1Q8N8E1 139 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 ARPC5LQ9BPX5 153 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 CCDC32Q9BV29 185 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 KCNIP2Q9NS61 270 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 FUT9Q9Y231 359 aa9.75□□□□□ -0.85
TPM1-202ENST00000288398 DYNC1H1Q14204 4646 aaKnown RBP9.75□□□□□ -0.85
TPM1-202ENST00000288398 IGSF23A1L1A6 192 aa9.74□□□□□ -0.85
TPM1-202ENST00000288398 PYYP10082 97 aa9.74□□□□□ -0.85
TPM1-202ENST00000288398 BTN1A1Q13410 526 aa9.74□□□□□ -0.85
TPM1-202ENST00000288398 ESRGQ1W209 222 aa9.74□□□□□ -0.85
TPM1-202ENST00000288398 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
TPM1-202ENST00000288398 SLC25A31Q9H0C2 315 aa9.74□□□□□ -0.85
TPM1-202ENST00000288398 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
TPM1-202ENST00000288398 ICAM4Q14773 271 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 FAM122CQ6P4D5 195 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 LINC00467Q9BRT7 94 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 NPCDR1Q9BY65 106 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 C11orf1Q9H5F2 150 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 ICOSQ9Y6W8 199 aa9.73□□□□□ -0.85
TPM1-202ENST00000288398 KLLNB2CW77 178 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 EREGO14944 169 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 PAX4O43316 350 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 NMBP08949 121 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 CSN1S1P47710 185 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 CD300CQ08708 224 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 THAP6Q8TBB0 222 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 AGPAT4-IT1Q9H0P7 198 aa9.72□□□□□ -0.85
TPM1-202ENST00000288398 IGKV2-40A0A087WW87 121 aaPredicted RBP9.71□□□□□ -0.86
TPM1-202ENST00000288398 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 NDUFB4O95168 129 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 IGKV2D-40P01614 121 aaPredicted RBP9.71□□□□□ -0.86
TPM1-202ENST00000288398 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 TCL1AP56279 114 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 SLAQ13239 276 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 IBA57Q5T440 356 aaKnown RBP9.71□□□□□ -0.86
TPM1-202ENST00000288398 C9orf47Q6ZRZ4 202 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 OR5C1Q8NGR4 320 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 ENKURQ8TC29 256 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 OR51M1Q9H341 326 aa9.71□□□□□ -0.86
TPM1-202ENST00000288398 IGHV1OR15-1A0A075B7D0 117 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 A0A096LPF7 62 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 E5RGE8 158 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 SIVA1O15304 175 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 ZNF324O75467 553 aaPredicted RBP9.7□□□□□ -0.86
TPM1-202ENST00000288398 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 CRISP2P16562 243 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 ZNF415Q09FC8 603 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 GCSAMLQ5JQS6 135 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 MIR17HGQ75NE6 70 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 ST6GAL2Q96JF0 529 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 PAXXQ9BUH6 204 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
TPM1-202ENST00000288398 KRTAP1-5Q9BYS1 174 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 KLF12Q9Y4X4 402 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 RYR1P21817 5038 aa9.7□□□□□ -0.86
TPM1-202ENST00000288398 OR7C2O60412 319 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 SPINK4O60575 86 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 OR10J4P0C629 311 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 ZNF138P52744 262 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 NHLH2Q02577 135 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 LRRC37A5PQ49AS3 106 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 S100ZQ8WXG8 99 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 FAM19A4Q96LR4 140 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
TPM1-202ENST00000288398 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
TPM1-202ENST00000288398 TRAV9-2A0A087WT02 112 aa9.68□□□□□ -0.86
TPM1-202ENST00000288398 NXPH4O95158 308 aa9.68□□□□□ -0.86
TPM1-202ENST00000288398 LINC00315P59091 139 aa9.68□□□□□ -0.86
TPM1-202ENST00000288398 CYCSP99999 105 aaKnown RBP9.68□□□□□ -0.86
TPM1-202ENST00000288398 IL15RAQ13261 267 aa9.68□□□□□ -0.86
TPM1-202ENST00000288398 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
TPM1-202ENST00000288398 VGLL1Q99990 258 aa9.68□□□□□ -0.86
TPM1-202ENST00000288398 ZNF492Q9P255 531 aa9.68□□□□□ -0.86
TPM1-202ENST00000288398 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 UBE2L3P68036 154 aaKnown RBP9.67□□□□□ -0.86
TPM1-202ENST00000288398 ASAH1Q13510 395 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
TPM1-202ENST00000288398 ZFAND2AQ8N6M9 145 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 KRTAP4-5Q9BYR2 181 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 NMES1Q9C002 83 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 TP53TG3Q9ULZ0 132 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms